RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ST13P5Q8NFI4 369 aaPredicted RBP16.01■□□□□ 0.15
ATG9A-220ENST00000475339 PIGSQ96S52 555 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 BCO2Q9BYV7 579 aa16.01■□□□□ 0.15
ATG9A-220ENST00000475339 SPEGQ15772 3267 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 TBC1D4O60343 1298 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 TSSK4Q6SA08 328 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 PPFIBP1Q86W92 1011 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 KIAA0319LQ8IZA0 1049 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 NXPE3Q969Y0 559 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 SLC2A4RGQ9NR83 387 aa16■□□□□ 0.15
ATG9A-220ENST00000475339 MTF2Q9Y483 593 aaPredicted RBP16■□□□□ 0.15
ATG9A-220ENST00000475339 ZZEF1O43149 2961 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 BAZ2BQ9UIF8 2168 aaKnown RBP15.99■□□□□ 0.15
ATG9A-220ENST00000475339 PROS1P07225 676 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 KLRC1P26715 233 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 ANTXR2P58335 489 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 LPAL2Q16609 132 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 N4BP2L1Q5TBK1 243 aaPredicted RBP15.99■□□□□ 0.15
ATG9A-220ENST00000475339 NELL1Q92832 810 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
ATG9A-220ENST00000475339 SHDQ96IW2 340 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 OSMRQ99650 979 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 AZI2Q9H6S1 392 aa15.99■□□□□ 0.15
ATG9A-220ENST00000475339 WDR6Q9NNW5 1121 aaKnown RBP15.99■□□□□ 0.15
ATG9A-220ENST00000475339 DOCK8Q8NF50 2099 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 KLRC2P26717 231 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 CLCN4P51793 760 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
ATG9A-220ENST00000475339 SHC2P98077 582 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 SNW1Q13573 536 aaKnown RBP15.98■□□□□ 0.15
ATG9A-220ENST00000475339 DDX53Q86TM3 631 aaKnown RBP15.98■□□□□ 0.15
ATG9A-220ENST00000475339 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 HELQQ8TDG4 1101 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 STAMQ92783 540 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 GPRASP2Q96D09 838 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 KLHL5Q96PQ7 755 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 MTA3Q9BTC8 594 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 MAD2L2Q9UI95 211 aa15.98■□□□□ 0.15
ATG9A-220ENST00000475339 FLNBO75369 2602 aaKnown RBP15.98■□□□□ 0.15
ATG9A-220ENST00000475339 IGF2RP11717 2491 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 CLUHO75153 1309 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 ITGB5P18084 799 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
ATG9A-220ENST00000475339 FGD1P98174 961 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 TRAF1Q13077 416 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 UBXN2BQ14CS0 331 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 USP17L6PQ6QN14 398 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 IGDCC4Q8TDY8 1250 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 BCL7CQ8WUZ0 217 aaPredicted RBP15.97■□□□□ 0.15
ATG9A-220ENST00000475339 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
ATG9A-220ENST00000475339 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 CDHR1Q96JP9 859 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 LY9Q9HBG7 655 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 ZMIZ1Q9ULJ6 1067 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 NUMBLQ9Y6R0 609 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 COL4A3Q01955 1670 aa15.97■□□□□ 0.15
ATG9A-220ENST00000475339 MIA3Q5JRA6 1907 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 CCDC195A0A1B0GUA6 201 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 PALM3A6NDB9 673 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 FAM170BA6NMN3 283 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 SOBPA7XYQ1 873 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 EPB41L2O43491 1005 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 GDF9O60383 454 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 ZC3H11AO75152 810 aaKnown RBP eCLIP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 DDAH1O94760 285 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 CNPP09543 421 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 MYBP10242 640 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 HSPA4P34932 840 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 STAT5BP51692 787 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 GPC5P78333 572 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 HTR4Q13639 388 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 CMASQ8NFW8 434 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 SMARCC2Q8TAQ2 1214 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 JAKMIP1Q96N16 626 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 RPP25Q9BUL9 199 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 DDX23Q9BUQ8 820 aaKnown RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 VN1R3Q9BXE9 311 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 SENP2Q9HC62 589 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 JPH1Q9HDC5 661 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-220ENST00000475339 MAN1C1Q9NR34 630 aa15.96■□□□□ 0.15
ATG9A-220ENST00000475339 PNMA6FA0A0J9YX94 578 aa15.95■□□□□ 0.14
ATG9A-220ENST00000475339 ANHXE9PGG2 379 aa15.95■□□□□ 0.14
ATG9A-220ENST00000475339 SSBP05455 408 aaKnown RBP eCLIP15.95■□□□□ 0.14
ATG9A-220ENST00000475339 LAMP2P13473 410 aa15.95■□□□□ 0.14
ATG9A-220ENST00000475339 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
ATG9A-220ENST00000475339 GRM4Q14833 912 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms