RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SNRPFP62306 86 aaKnown RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 POU5F1BQ06416 359 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 PAK1Q13153 545 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 MTFR1Q15390 333 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 COBLL1Q53SF7 1204 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 KLHL10Q6JEL2 608 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 HAUS6Q7Z4H7 955 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 CCDC155Q8N6L0 562 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 LRRC15Q8TF66 581 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 LMBR1Q8WVP7 490 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 PDLIM7Q9NR12 457 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 CGNQ9P2M7 1197 aaKnown RBP11.4□□□□□ -0.58
COL12A1-206ENST00000474564 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
COL12A1-206ENST00000474564 MYH9P35579 1960 aaKnown RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 IGKV6-21A0A0C4DH24 114 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 RSPH10B2B2RC85 870 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 RSPH10BP0C881 870 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 PRCPP42785 496 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 NPTX2P47972 431 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 LRRC63Q05C16 580 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 LAMTOR4Q0VGL1 99 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 STK4Q13043 487 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 PCBP1Q15365 356 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 PTGISQ16647 500 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 ZNF720Q7Z2F6 126 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 ZNF410Q86VK4 478 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 FAM114A1Q8IWE2 563 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 LRRC71Q8N4P6 559 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 TRAPPC12Q8WVT3 735 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 BICD1Q96G01 975 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 BPIFA3Q9BQP9 254 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 GCOM2Q9BZD3 368 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 FAM49AQ9H0Q0 323 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 RBSNQ9H1K0 784 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 ST6GALNAC4Q9H4F1 302 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-206ENST00000474564 RWDD2AQ9UIY3 292 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
COL12A1-206ENST00000474564 DOCK5Q9H7D0 1870 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 A0A1W2PQ45 241 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-206ENST00000474564 A0A1W2PQY0 241 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 DENND3A2RUS2 1198 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 MBLAC1A4D2B0 266 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-206ENST00000474564 DCDC2CA8MYV0 355 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 ZBTB42B2RXF5 422 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 ARVCFO00192 962 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 SLC16A4O15374 487 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 CDK11BP21127 795 aaKnown RBP11.38□□□□□ -0.59
COL12A1-206ENST00000474564 CCNE1P24864 410 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 GJA8P48165 433 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 CLCN3P51790 818 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 MYL5Q02045 173 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 MAPK6Q16659 721 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 KNOP1Q1ED39 458 aaKnown RBP11.38□□□□□ -0.59
COL12A1-206ENST00000474564 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 ADSSL1Q8N142 457 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 RNF149Q8NC42 400 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 ZNF507Q8TCN5 953 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 NELFBQ8WX92 580 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 P2RX5Q93086 422 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 NLRP4Q96MN2 994 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-206ENST00000474564 TMEM134Q9H6X4 195 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 XPNPEP1Q9NQW7 623 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
COL12A1-206ENST00000474564 INO80B-WBP1J3KQ70 363 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 PDXKO00764 312 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 IKBKBO14920 756 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 CAND2O75155 1236 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 ERLIN2O94905 339 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 GLRA2P23416 452 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 NMT1P30419 496 aaKnown RBP11.37□□□□□ -0.59
COL12A1-206ENST00000474564 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL12A1-206ENST00000474564 NCKAP1LP55160 1127 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 NLRP11P59045 1033 aaKnown RBP11.37□□□□□ -0.59
COL12A1-206ENST00000474564 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-206ENST00000474564 GTF2BQ00403 316 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 EHHADHQ08426 723 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 MAPK7Q13164 816 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 PTK7Q13308 1070 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 BFSP2Q13515 415 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 UVSSAQ2YD98 709 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 SPATA1Q5VX52 437 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 SLFN12LQ6IEE8 588 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 FOXR2Q6PJQ5 311 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 DAW1Q8N136 415 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms