RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 SSBP05455 408 aaKnown RBP eCLIP20.51■□□□□ 0.87
CASP9-209ENST00000474305 SRGAP2CP0DJJ0 459 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 CD52P31358 61 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 TFDP1Q14186 410 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 E2F4Q16254 413 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 ZNF668Q96K58 619 aaPredicted RBP20.51■□□□□ 0.87
CASP9-209ENST00000474305 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 MTIF3Q9H2K0 278 aaKnown RBP20.51■□□□□ 0.87
CASP9-209ENST00000474305 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 ST3GAL5Q9UNP4 418 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 TRIOBPQ9H2D6 2365 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 MICAL3Q7RTP6 2002 aa20.51■□□□□ 0.87
CASP9-209ENST00000474305 MYH11P35749 1972 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 FAM237AA0A1B0GTK4 181 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 A0A1W2PQ27 194 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 A0A1W2PQ64 194 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 A0A1W2PQD8 194 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 PTENP60484 403 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 PAK2Q13177 524 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 FAM228AQ86W67 206 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 DAW1Q8N136 415 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 RNF149Q8NC42 400 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 RNPC3Q96LT9 517 aaKnown RBP20.5■□□□□ 0.87
CASP9-209ENST00000474305 NLRP4Q96MN2 994 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 FTHL17Q9BXU8 183 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 CUEDC2Q9H467 287 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 C17orf75Q9HAS0 396 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
CASP9-209ENST00000474305 CXXC1Q9P0U4 656 aaPredicted RBP20.5■□□□□ 0.87
CASP9-209ENST00000474305 RBAK-RBAKDNI3L0D1 243 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 STAT6P42226 847 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 MAPK7Q13164 816 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 CAPSQ13938 189 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 GPBP1Q86WP2 473 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 PDILTQ8N807 584 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 IQUBQ8NA54 791 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 DRC1Q96MC2 740 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 SCLT1Q96NL6 688 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 KCNG1Q9UIX4 513 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
CASP9-209ENST00000474305 ENPP3O14638 875 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 HIP1RO75146 1068 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 NAMPTP43490 491 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 PHKA2P46019 1235 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 NFX1Q12986 1120 aaKnown RBP20.48■□□□□ 0.87
CASP9-209ENST00000474305 DHX8Q14562 1220 aaKnown RBP20.48■□□□□ 0.87
CASP9-209ENST00000474305 PPP2R5AQ15172 486 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 PCBP1Q15365 356 aaKnown RBP eCLIP20.48■□□□□ 0.87
CASP9-209ENST00000474305 RTN4RL1Q86UN2 441 aaPredicted RBP20.48■□□□□ 0.87
CASP9-209ENST00000474305 PHOSPHO2Q8TCD6 241 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 BSNDQ8WZ55 320 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 IFT74Q96LB3 600 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 PYM1Q9BRP8 204 aaKnown RBP20.48■□□□□ 0.87
CASP9-209ENST00000474305 NTPCRQ9BSD7 190 aaKnown RBP20.48■□□□□ 0.87
CASP9-209ENST00000474305 MINDY3Q9H8M7 445 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 ODF2LQ9ULJ1 636 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 TTC3P53804 2025 aa20.48■□□□□ 0.87
CASP9-209ENST00000474305 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
CASP9-209ENST00000474305 CSDE1O75534 798 aaKnown RBP20.47■□□□□ 0.87
CASP9-209ENST00000474305 WDR5P61964 334 aaKnown RBP20.47■□□□□ 0.87
CASP9-209ENST00000474305 GIT2Q14161 759 aa20.47■□□□□ 0.87
CASP9-209ENST00000474305 LRIT3Q3SXY7 679 aa20.47■□□□□ 0.87
CASP9-209ENST00000474305 CDCA2Q69YH5 1023 aaPredicted RBP20.47■□□□□ 0.87
CASP9-209ENST00000474305 KBTBD4Q9NVX7 518 aa20.47■□□□□ 0.87
CASP9-209ENST00000474305 SLC4A7Q9Y6M7 1214 aa20.47■□□□□ 0.87
CASP9-209ENST00000474305 NPHP3-ACAD11A0A0J9YXS1 232 aa20.46■□□□□ 0.87
CASP9-209ENST00000474305 A0A1B0GVL5 298 aa20.46■□□□□ 0.87
CASP9-209ENST00000474305 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.46■□□□□ 0.87
CASP9-209ENST00000474305 SFPQP23246 707 aaKnown RBP eCLIP20.46■□□□□ 0.87
CASP9-209ENST00000474305 DSC3Q14574 896 aa20.46■□□□□ 0.87
CASP9-209ENST00000474305 DHX58Q96C10 678 aa20.46■□□□□ 0.87
CASP9-209ENST00000474305 TSPYL2Q9H2G4 693 aaPredicted RBP20.46■□□□□ 0.87
CASP9-209ENST00000474305 CHST12Q9NRB3 414 aa20.46■□□□□ 0.87
CASP9-209ENST00000474305 MYMKA6NI61 221 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 LRRIQ4A6NIV6 560 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 SFI1A8K8P3 1242 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 ZBBXA8MT70 800 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 PLS3P13797 630 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 PFKFB1P16118 471 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 FGFR4P22455 802 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 ZNF131P52739 623 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 MBTD1Q05BQ5 628 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 RAD51AP2Q09MP3 1159 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 CSPP1Q1MSJ5 1256 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.45■□□□□ 0.86
CASP9-209ENST00000474305 SPIRE2Q8WWL2 714 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 LINC01599Q8WXQ3 324 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 SLC9A7Q96T83 725 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 REEP2Q9BRK0 252 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 LRRC27Q9C0I9 530 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 C2orf40Q9H1Z8 148 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 TNMDQ9H2S6 317 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 MAGEF1Q9HAY2 307 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 RGS18Q9NS28 235 aa20.45■□□□□ 0.86
CASP9-209ENST00000474305 USP25Q9UHP3 1055 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms