RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 ARHGAP28Q9P2N2 729 aa6.18□□□□□ -1.42
BBX-223ENST00000473542 ZNF180Q9UJW8 692 aa6.18□□□□□ -1.42
BBX-223ENST00000473542 ANKRD6Q9Y2G4 727 aa6.18□□□□□ -1.42
BBX-223ENST00000473542 GIT1Q9Y2X7 761 aa6.18□□□□□ -1.42
BBX-223ENST00000473542 NUMBLQ9Y6R0 609 aa6.18□□□□□ -1.42
BBX-223ENST00000473542 KLHL33A6NCF5 533 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 OVOL3O00110 214 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 MAFGO15525 162 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 MPIG6BO95866 241 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 MRPS9P82933 396 aaKnown RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 PCBP2Q15366 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
BBX-223ENST00000473542 PRR31Q5SQ13 230 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 VASNQ6EMK4 673 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 KIAA1841Q6NSI8 718 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 PNMA8AQ86V59 439 aaPredicted RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 LGI4Q8N135 537 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 TXNDC5Q8NBS9 432 aaKnown RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 CHST13Q8NET6 341 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 DVL3Q92997 716 aaPredicted RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 TSR2Q969E8 191 aaKnown RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 TUBGCP5Q96RT8 1024 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 TMEM209Q96SK2 561 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 INCENPQ9NQS7 918 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 ZNF277Q9NRM2 450 aaPredicted RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 LUC7L2Q9Y383 392 aaKnown RBP6.17□□□□□ -1.42
BBX-223ENST00000473542 ZNF536O15090 1300 aa6.17□□□□□ -1.42
BBX-223ENST00000473542 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 GOLGA6CA6NDK9 693 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 GOLGA6BA6NDN3 693 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 DDX3XO00571 662 aaKnown RBP eCLIP6.16□□□□□ -1.42
BBX-223ENST00000473542 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
BBX-223ENST00000473542 GOLGA6DP0CG33 693 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 TACR2P21452 398 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 MTNR1BP49286 362 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 ITGA1P56199 1179 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 BCAR1P56945 870 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 ADCY2Q08462 1091 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 ICAM4Q14773 271 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 MYBPC3Q14896 1274 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 UGT8Q16880 541 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 FAM26FQ5R3K3 315 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 PRAMEF18Q5VWM3 479 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 SLFN12LQ6IEE8 588 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 CD300LDQ6UXZ3 194 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 KCNK18Q7Z418 384 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 ZFPM1Q8IX07 1006 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 CMIPQ8IY22 773 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 CMTR2Q8IYT2 770 aaKnown RBP6.16□□□□□ -1.42
BBX-223ENST00000473542 DTX3Q8N9I9 347 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 KYQ8NBH2 561 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
BBX-223ENST00000473542 BTBD2Q9BX70 525 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 DLL4Q9NR61 685 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 GOLGA6AQ9NYA3 693 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 WASF3Q9UPY6 502 aa6.16□□□□□ -1.42
BBX-223ENST00000473542 ST20-MTHFSA0A0A6YYL1 179 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA12O60330 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 B4GALT3O60512 393 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 AGXTP21549 392 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 HMGA2P52926 109 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PFKPQ01813 784 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 SLC6A3Q01959 620 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 KIAA2012Q0VF49 1180 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 LRRC41Q15345 812 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.15□□□□□ -1.42
BBX-223ENST00000473542 CXXC5Q7LFL8 322 aaKnown RBP6.15□□□□□ -1.42
BBX-223ENST00000473542 MAGEB6Q8N7X4 407 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 RPGRQ92834 1020 aaKnown RBP6.15□□□□□ -1.42
BBX-223ENST00000473542 ERCC4Q92889 916 aaPredicted RBP6.15□□□□□ -1.42
BBX-223ENST00000473542 FERMT2Q96AC1 680 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 WRNIP1Q96S55 665 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 MYL10Q9BUA6 226 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 AMNQ9BXJ7 453 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 SEMA4AQ9H3S1 761 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 DNAJC28Q9NX36 388 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PPP4R1LQ9P1A2 415 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 DENND2AQ9ULE3 1009 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA7Q9Y5G6 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA6Q9Y5G7 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PCDHGA2Q9Y5H1 932 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 GPR45Q9Y5Y3 372 aa6.15□□□□□ -1.42
BBX-223ENST00000473542 PRSS38A1L453 326 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 LCHNA4D1U4 455 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 H2AFYO75367 372 aaKnown RBP6.14□□□□□ -1.43
BBX-223ENST00000473542 PFKMP08237 780 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 MC4RP32245 332 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 CYP2C19P33261 490 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 STAT5AP42229 794 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 ECE1P42892 770 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 GPR15P49685 360 aa6.14□□□□□ -1.43
BBX-223ENST00000473542 SLC5A3P53794 718 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms