RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PLXNA3P51805 1871 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 OTOGLQ3ZCN5 2332 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 CHD6Q8TD26 2715 aa7.21□□□□□ -1.26
HDAC1-205ENST00000472928 DOCK5Q9H7D0 1870 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 LOC730098B7Z3J9 87 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 ZBTB24O43167 697 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 NCK2O43639 380 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 PPP1R11O60927 126 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 DKK1O94907 266 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 F2P00734 622 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 GH1P01241 217 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 GTF2F1P35269 517 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 GGCXP38435 758 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 WNT7BP56706 349 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 SKOR1P84550 965 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 ZXDAP98168 799 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 STK38Q15208 465 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 LY6KQ17RY6 165 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 PLEKHG4Q58EX7 1191 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 ATL3Q6DD88 541 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 PHLDB3Q6NSJ2 640 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 RNF207Q6ZRF8 634 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 BLIDQ8IZY5 108 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 FAM177A1Q8N128 213 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 FBXL6Q8N531 539 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 RASGRP4Q8TDF6 673 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 RNF166Q96A37 237 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 MTMR8Q96EF0 704 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 YME1L1Q96TA2 773 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 CFAP45Q9UL16 551 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 NOL7Q9UMY1 257 aaKnown RBP7.2□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHA4Q9UN74 947 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 KIAA1024Q9UPX6 916 aa7.2□□□□□ -1.26
HDAC1-205ENST00000472928 NLRC5Q86WI3 1866 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 KMT2BQ9UMN6 2715 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 C5orf67F2Z3F1 127 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 GRM6O15303 877 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 LINC01565O15544 149 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 GADD45BO75293 160 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 YEATS4O95619 227 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 MBD3O95983 291 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 ZNF286BP0CG31 522 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 UBE2HP62256 183 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 CAMK1Q14012 370 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 CBX2Q14781 532 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 KIAA0753Q2KHM9 967 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 SKOR2Q2VWA4 1001 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 USH1GQ495M9 461 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 GALNT17Q6IS24 598 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 PIK3AP1Q6ZUJ8 805 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 SERINC5Q86VE9 423 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 SIX5Q8N196 739 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 REXO1Q8N1G1 1221 aaKnown RBP7.19□□□□□ -1.26
HDAC1-205ENST00000472928 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 DNERQ8NFT8 737 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 BICD2Q8TD16 824 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 GPT2Q8TD30 523 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 KCNG4Q8TDN1 519 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 TOP1MTQ969P6 601 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 ASIC4Q96FT7 647 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 MSLNLQ96KJ4 702 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 ZMYND12Q9H0C1 365 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 C6orf50Q9HD87 102 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 CD207Q9UJ71 328 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 MAP4K5Q9Y4K4 846 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 CLIC4Q9Y696 253 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 EMSYQ7Z589 1322 aa7.19□□□□□ -1.26
HDAC1-205ENST00000472928 RALGAPA2Q2PPJ7 1873 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 GOLGA6L4A6NEF3 574 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 SMCO2A6NFE2 343 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RSPH10B2B2RC85 870 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 PROB1E7EW31 1015 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 EYA4O95677 639 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RSPH10BP0C881 870 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 ATP2B1P20020 1258 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 VARSP26640 1264 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 GNA11P29992 359 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 AVPR2P30518 371 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 HOXC8P31273 242 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 CTNNB1P35222 781 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 THPOP40225 353 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 ME1P48163 572 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RPIAP49247 311 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 ADAM15Q13444 863 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 SF3A1Q15459 793 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 DGKDQ16760 1214 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 UBE2SQ16763 222 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 SWI5Q1ZZU3 235 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms