RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 WDR18Q9BV38 432 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 PARD6BQ9BYG5 372 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ZNF341Q9BYN7 854 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ZSWIM4Q9H7M6 989 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 TMEM206Q9H813 350 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 FAM53CQ9NYF3 392 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 AIPL1Q9NZN9 384 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 ARHGAP20Q9P2F6 1191 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 RNF14Q9UBS8 474 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
CCDC171-205ENST00000472806 RAB21Q9UL25 225 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 FRMD4BQ9Y2L6 1034 aa8.36□□□□□ -1.07
CCDC171-205ENST00000472806 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 TARSL2A2RTX5 802 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 IPO5O00410 1097 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 EML1O00423 815 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 SLITRK3O94933 977 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 P4HBP07237 508 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PNMA6AP0CW24 399 aaPredicted RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 RFX1P22670 979 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PAFAH1B1P43034 410 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 JAK3P52333 1124 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 ZNF131P52739 623 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 POLR2FP61218 127 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PSMC6P62333 389 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 RAD51AP2Q09MP3 1159 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 KLHL30Q0D2K2 578 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 RAPGEF1Q13905 1077 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 CTTNQ14247 550 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 RASA3Q14644 834 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PPP2R5AQ15172 486 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 ZYXQ15942 572 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 SLC18A3Q16572 532 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 EXOC3L4Q17RC7 722 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 UTP14CQ5TAP6 766 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PCNX4Q63HM2 1172 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 WDR93Q6P2C0 686 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 MIGA2Q7L4E1 593 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 HDXQ7Z353 690 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 FAM178BQ8IXR5 827 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 LRRN4CLQ8ND94 238 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 RDM1Q8NG50 284 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 SPAG5Q96R06 1193 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 JADE2Q9NQC1 790 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 LARSQ9P2J5 1176 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 PGAP2Q9UHJ9 254 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 DBR1Q9UK59 544 aaKnown RBP8.35□□□□□ -1.07
CCDC171-205ENST00000472806 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
CCDC171-205ENST00000472806 ATAD5Q96QE3 1844 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 MACROD2A1Z1Q3 448 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 BTNL10A8MVZ5 291 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 CHMP2AO43633 222 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 N4BP1O75113 896 aaKnown RBP8.34□□□□□ -1.07
CCDC171-205ENST00000472806 FLOT1O75955 427 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 PRPF6O94906 941 aaKnown RBP8.34□□□□□ -1.07
CCDC171-205ENST00000472806 LYPLA2O95372 231 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 MYBP10242 640 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 FERP16591 822 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 SFNP31947 248 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 ABCD1P33897 745 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 KRT76Q01546 638 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 CETN1Q12798 172 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 ASTE1Q2TB18 679 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-205ENST00000472806 TKFCQ3LXA3 575 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 KIAA1755Q5JYT7 1200 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 B3GNT9Q6UX72 402 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 NLRX1Q86UT6 975 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 APOBEC3FQ8IUX4 373 aaKnown RBP8.34□□□□□ -1.07
CCDC171-205ENST00000472806 SLC9A9Q8IVB4 645 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 FAM186BQ8IYM0 893 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 CALR3Q96L12 384 aaKnown RBP8.34□□□□□ -1.07
CCDC171-205ENST00000472806 LXNQ9BS40 222 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 GANQ9H2C0 597 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 UNC45AQ9H3U1 944 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 SLC38A10Q9HBR0 1119 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 NLRC4Q9NPP4 1024 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 RGL1Q9NZL6 768 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 KCNG1Q9UIX4 513 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 SNX12Q9UMY4 172 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 PPP2R3BQ9Y5P8 575 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 UBIAD1Q9Y5Z9 338 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 FHOD1Q9Y613 1164 aa8.34□□□□□ -1.07
CCDC171-205ENST00000472806 ASTN1O14525 1302 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 A0A0U1RQJ8 604 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 EPHB6O15197 1021 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 P4HA2O15460 535 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 MAFGO15525 162 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 NOL4O94818 638 aa8.33□□□□□ -1.08
CCDC171-205ENST00000472806 ATP1A1P05023 1023 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms