RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 TMEM117Q9H0C3 514 aa21.67■■□□□ 1.06
COMMD1-208ENST00000472729 ALG13Q9NP73 1137 aaKnown RBP21.67■■□□□ 1.06
COMMD1-208ENST00000472729 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
COMMD1-208ENST00000472729 MYO9BQ13459 2157 aa21.67■■□□□ 1.06
COMMD1-208ENST00000472729 A0A0U1RQF3 1178 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 POTEMA6NI47 508 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 NCK2O43639 380 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 XRCC6P12956 609 aaKnown RBP eCLIP21.66■■□□□ 1.06
COMMD1-208ENST00000472729 PHKA2P46019 1235 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 LAMTOR4Q0VGL1 99 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 HAUS3Q68CZ6 603 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 SRGAP1Q7Z6B7 1085 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 ECHDC2Q86YB7 292 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 THNSL1Q8IYQ7 743 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 RNF149Q8NC42 400 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 MICAL1Q8TDZ2 1067 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 TBC1D32Q96NH3 1257 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 NACC1Q96RE7 527 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 TMEM60Q9H2L4 133 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 TUFT1Q9NNX1 390 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 PLAGL2Q9UPG8 496 aa21.66■■□□□ 1.06
COMMD1-208ENST00000472729 MICAL3Q7RTP6 2002 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 WNT7AO00755 349 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 ZBTB39O15060 712 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 GRM6O15303 877 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 ERLIN2O94905 339 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 LAG3P18627 525 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 LRRC43Q8N309 656 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 KLHL23Q8NBE8 558 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 ADAMTS19Q8TE59 1207 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 PIGOQ8TEQ8 1089 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 TYW1Q9NV66 732 aaKnown RBP21.65■■□□□ 1.06
COMMD1-208ENST00000472729 STK24Q9Y6E0 443 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 A0A0C4DFX4 3053 aa21.65■■□□□ 1.06
COMMD1-208ENST00000472729 EYSQ5T1H1 3165 aa21.64■■□□□ 1.06
COMMD1-208ENST00000472729 COL4A6Q14031 1691 aa21.64■■□□□ 1.05
COMMD1-208ENST00000472729 U2AF2P26368 475 aaKnown RBP eCLIP21.64■■□□□ 1.05
COMMD1-208ENST00000472729 RAB27AP51159 221 aa21.64■■□□□ 1.05
COMMD1-208ENST00000472729 TCEAL5Q5H9L2 206 aa21.64■■□□□ 1.05
COMMD1-208ENST00000472729 FERMT3Q86UX7 667 aa21.64■■□□□ 1.05
COMMD1-208ENST00000472729 UHRF1Q96T88 793 aaPredicted RBP21.64■■□□□ 1.05
COMMD1-208ENST00000472729 UBE2ZQ9H832 354 aaPredicted RBP21.64■■□□□ 1.05
COMMD1-208ENST00000472729 PUF60Q9UHX1 559 aaKnown RBP21.64■■□□□ 1.05
COMMD1-208ENST00000472729 UNC80Q8N2C7 3258 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 KCNA5P22460 613 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 GJB2P29033 226 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 CATSPER3Q86XQ3 398 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 RSPH1Q8WYR4 309 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 PGBD4Q96DM1 585 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 POLR3CQ9BUI4 534 aaPredicted RBP21.63■■□□□ 1.05
COMMD1-208ENST00000472729 MRPL9Q9BYD2 267 aaKnown RBP21.63■■□□□ 1.05
COMMD1-208ENST00000472729 CHD7Q9P2D1 2997 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 LRWD1Q9UFC0 647 aa21.63■■□□□ 1.05
COMMD1-208ENST00000472729 RARRES1P49788 294 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 KCNQ1P51787 676 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 KRT17Q04695 432 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 PCBP1Q15365 356 aaKnown RBP eCLIP21.62■■□□□ 1.05
COMMD1-208ENST00000472729 RILPL1Q5EBL4 403 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 GLB1LQ6UWU2 654 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 IFT122Q9HBG6 1241 aa21.62■■□□□ 1.05
COMMD1-208ENST00000472729 ARHGEF35A5YM69 484 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 INO80B-WBP1J3KQ70 363 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 LAD1O00515 517 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 USO1O60763 962 aaKnown RBP21.61■■□□□ 1.05
COMMD1-208ENST00000472729 ITGB1P05556 798 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 LINC00271P0C7V0 271 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 RPA1P27694 616 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 PPM1AP35813 382 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 CCT6AP40227 531 aaKnown RBP21.61■■□□□ 1.05
COMMD1-208ENST00000472729 UBE3AQ05086 875 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 MCPH1Q8NEM0 835 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 HELQQ8TDG4 1101 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 POF1BQ8WVV4 589 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 ZNF558Q96NG5 402 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 CASD1Q96PB1 797 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 IGFLR1Q9H665 355 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 FAM105AQ9NUU6 356 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 CLDND1Q9NY35 253 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 FAM50BQ9Y247 325 aa21.61■■□□□ 1.05
COMMD1-208ENST00000472729 MYH9P35579 1960 aaKnown RBP21.61■■□□□ 1.05
COMMD1-208ENST00000472729 PRRC2BQ5JSZ5 2229 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 TNFRSF10AO00220 468 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 FGF18O76093 207 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 ALDH7A1P49419 539 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 RNASELQ05823 741 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 PTGDRQ13258 359 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 NBR1Q14596 966 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 BMS1Q14692 1282 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 PUS10Q3MIT2 529 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 KRT79Q5XKE5 535 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 LARP1BQ659C4 914 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 DTHD1Q6ZMT9 781 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 MAEAQ7L5Y9 396 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 COLGALT1Q8NBJ5 622 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 SPPL3Q8TCT6 385 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 PABPC5Q96DU9 382 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 TRAIPQ9BWF2 469 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 AGPAT5Q9NUQ2 364 aa21.6■■□□□ 1.05
COMMD1-208ENST00000472729 DBR1Q9UK59 544 aaKnown RBP21.6■■□□□ 1.05
COMMD1-208ENST00000472729 PTPRSQ13332 1948 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms