RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 SENP7Q9BQF6 1050 aa6.74□□□□□ -1.33
SIK3-208ENST00000472648 LSM14BQ9BX40 385 aaKnown RBP6.74□□□□□ -1.33
SIK3-208ENST00000472648 TMEM121BQ9BXQ6 578 aaPredicted RBP6.74□□□□□ -1.33
SIK3-208ENST00000472648 VAT1LQ9HCJ6 419 aa6.74□□□□□ -1.33
SIK3-208ENST00000472648 FAM217BQ9NTX9 383 aaPredicted RBP6.74□□□□□ -1.33
SIK3-208ENST00000472648 RTEL1Q9NZ71 1219 aa6.74□□□□□ -1.33
SIK3-208ENST00000472648 ANAPC4Q9UJX5 808 aa6.74□□□□□ -1.33
SIK3-208ENST00000472648 MRPS17Q9Y2R5 130 aaKnown RBP6.74□□□□□ -1.33
SIK3-208ENST00000472648 ZFP37Q9Y6Q3 630 aaPredicted RBP6.74□□□□□ -1.33
SIK3-208ENST00000472648 GCOM1H8Y6P7 765 aaPredicted RBP6.73□□□□□ -1.33
SIK3-208ENST00000472648 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
SIK3-208ENST00000472648 POLR2MP0CAP2 368 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 ZSCAN20P17040 1043 aaPredicted RBP6.73□□□□□ -1.33
SIK3-208ENST00000472648 SPINK2P20155 84 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 TARSP26639 723 aaKnown RBP6.73□□□□□ -1.33
SIK3-208ENST00000472648 NOVA1P51513 510 aaKnown RBP6.73□□□□□ -1.33
SIK3-208ENST00000472648 CCR3P51677 355 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 WTAPQ15007 396 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 PLCB4Q15147 1175 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 SF3A2Q15428 464 aaKnown RBP6.73□□□□□ -1.33
SIK3-208ENST00000472648 TPRG1Q6ZUI0 275 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 MTSS1LQ765P7 747 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 PNMA1Q8ND90 353 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 GATA6Q92908 595 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 IGSF21Q96ID5 467 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 RHOBTB2Q9BYZ6 727 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 AZI2Q9H6S1 392 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 JMJD4Q9H9V9 463 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 ECHDC1Q9NTX5 307 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 RNF19AQ9NV58 838 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 THADAQ6YHU6 1953 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 FRMPD4Q14CM0 1322 aa6.73□□□□□ -1.33
SIK3-208ENST00000472648 VWA8A3KMH1 1905 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 GSTTP1A0A1W2PQM5 241 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 ADH1AP07327 375 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 CNPP09543 421 aaKnown RBP6.72□□□□□ -1.33
SIK3-208ENST00000472648 PARP1P09874 1014 aaKnown RBP6.72□□□□□ -1.33
SIK3-208ENST00000472648 TDGF1P13385 188 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 CNR2P34972 360 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 TRAF1Q13077 416 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 CLLU1OSQ5K130 101 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 MTHFD1LQ6UB35 978 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 ZNF852Q6ZMS4 543 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 CEP68Q76N32 757 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 NLRX1Q86UT6 975 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 FAM228AQ86W67 206 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 TMEM173Q86WV6 379 aaPredicted RBP6.72□□□□□ -1.33
SIK3-208ENST00000472648 ECHDC2Q86YB7 292 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 FAM160A2Q8N612 972 aaPredicted RBP6.72□□□□□ -1.33
SIK3-208ENST00000472648 FGF14Q92915 247 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 PPP1R16BQ96T49 567 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 OSMRQ99650 979 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 IER2Q9BTL4 223 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 MRPL17Q9NRX2 175 aaKnown RBP6.72□□□□□ -1.33
SIK3-208ENST00000472648 RXFP3Q9NSD7 469 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 STK39Q9UEW8 545 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 CEP192Q8TEP8 1941 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 ATG2BQ96BY7 2078 aa6.72□□□□□ -1.33
SIK3-208ENST00000472648 C2CD2LO14523 706 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 RFPL2O75678 378 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 GLUD1P00367 558 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 URODP06132 367 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 FGRP09769 529 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 MYBP10242 640 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 CRYBB1P53674 252 aaPredicted RBP6.71□□□□□ -1.34
SIK3-208ENST00000472648 RNASELQ05823 741 aaKnown RBP6.71□□□□□ -1.34
SIK3-208ENST00000472648 SRSF5Q13243 272 aaKnown RBP6.71□□□□□ -1.34
SIK3-208ENST00000472648 DSC3Q14574 896 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 CCDC6Q16204 474 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 KIZQ2M2Z5 673 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 RNF43Q68DV7 783 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 C19orf48Q6RUI8 117 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 PARM1Q6UWI2 310 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 MIER1Q8N108 512 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 CDHR1Q96JP9 859 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 ZKSCAN3Q9BRR0 538 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 RPP25Q9BUL9 199 aaKnown RBP6.71□□□□□ -1.34
SIK3-208ENST00000472648 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 ARRDC1-AS1Q9H2J1 176 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 KAT14Q9H8E8 782 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 CDHR5Q9HBB8 845 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 NDRG2Q9UN36 371 aaKnown RBP6.71□□□□□ -1.34
SIK3-208ENST00000472648 ADAMTS9Q9P2N4 1935 aa6.71□□□□□ -1.34
SIK3-208ENST00000472648 CHURC1-FNTBB4DL54 471 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 GIPC1O14908 333 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 ZBTB5O15062 677 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 AXIN1O15169 862 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 FOXP2O15409 715 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 HRO43593 1189 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 SEC24BO95487 1268 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 ZNF806P0C7X5 589 aa6.7□□□□□ -1.34
SIK3-208ENST00000472648 PCP11498 1178 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms