RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ERVK-21P61565 698 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 LPIN1Q14693 890 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 Q4G0T1 1027 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 ATXN2LQ8WWM7 1075 aaKnown RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 SEPT8Q92599 483 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 GJA10Q969M2 543 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 NECAB3Q96P71 396 aaPredicted RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 ZNF577Q9BSK1 485 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 SMARCAD1Q9H4L7 1026 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
SMC4-213ENST00000472282 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
SMC4-213ENST00000472282 IGKV6D-21A0A0A0MT36 114 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 IPO5O00410 1097 aaKnown RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 STX6O43752 255 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 ATG7O95352 703 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 ATP4AP20648 1035 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 TMEM62Q0P6H9 643 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 PTPRNQ16849 979 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 FBXO47Q5MNV8 452 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 PPP4R3AQ6IN85 833 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 RPAINQ86UA6 219 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 FERMT3Q86UX7 667 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 CCDC60Q8IWA6 550 aaPredicted RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 LINC01599Q8WXQ3 324 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 NAP1L4Q99733 375 aaKnown RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 AGO3Q9H9G7 860 aaKnown RBP10.28□□□□□ -0.76
SMC4-213ENST00000472282 MTMR6Q9Y217 621 aa10.28□□□□□ -0.76
SMC4-213ENST00000472282 BMP1P13497 986 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 MCM7P33993 719 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.77
SMC4-213ENST00000472282 TRAPPC10P48553 1259 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 STAT5BP51692 787 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 MRPS5P82675 430 aaKnown RBP10.27□□□□□ -0.77
SMC4-213ENST00000472282 MRPS6P82932 125 aaKnown RBP10.27□□□□□ -0.77
SMC4-213ENST00000472282 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
SMC4-213ENST00000472282 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 TAF2Q6P1X5 1199 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 PLPPR4Q7Z2D5 763 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 RTN4RL1Q86UN2 441 aaPredicted RBP10.27□□□□□ -0.77
SMC4-213ENST00000472282 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 TBC1D22BQ9NU19 505 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 A0A0C4DFX4 3053 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 BRWD1Q9NSI6 2320 aa10.27□□□□□ -0.77
SMC4-213ENST00000472282 VCANP13611 3396 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 NEMFO60524 1076 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 GAS7O60861 476 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 LINC00271P0C7V0 271 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 SNRPBP14678 240 aaKnown RBP10.26□□□□□ -0.77
SMC4-213ENST00000472282 CD52P31358 61 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 TOB1P50616 345 aaPredicted RBP10.26□□□□□ -0.77
SMC4-213ENST00000472282 RESTQ13127 1097 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 ZNF174Q15697 407 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 CALCRLQ16602 461 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 RILPL1Q5EBL4 403 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 BRAPQ7Z569 592 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 HAS1Q92839 578 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 APBB2Q92870 758 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 TMEM60Q9H2L4 133 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 AZI2Q9H6S1 392 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 RC3H2Q9HBD1 1191 aaKnown RBP10.26□□□□□ -0.77
SMC4-213ENST00000472282 TCEAL9Q9UHQ7 104 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 PCDHGC3Q9UN70 934 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 PCDHB6Q9Y5E3 794 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 PCDHA2Q9Y5H9 948 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 TRANK1O15050 2925 aa10.26□□□□□ -0.77
SMC4-213ENST00000472282 SPTBN5Q9NRC6 3674 aaKnown RBP10.26□□□□□ -0.77
SMC4-213ENST00000472282 MYH11P35749 1972 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 MYO7AQ13402 2215 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 RRN3P2A6NIE6 340 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 ENPP3O14638 875 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
SMC4-213ENST00000472282 TBX3O15119 743 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 CHMP2AO43633 222 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 MARCH6O60337 910 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 PSMD10O75832 226 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 KLRC1P26715 233 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 KRT76Q01546 638 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 ORC2Q13416 577 aaPredicted RBP10.25□□□□□ -0.77
SMC4-213ENST00000472282 PKP1Q13835 747 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 EPC2Q52LR7 807 aa10.25□□□□□ -0.77
SMC4-213ENST00000472282 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
SMC4-213ENST00000472282 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
SMC4-213ENST00000472282 ZNF746Q6NUN9 644 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms