RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 SEMA6CQ9H3T2 930 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 PFDN4Q9NQP4 134 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 GNL3LQ9NVN8 582 aaKnown RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 GOLGA6AQ9NYA3 693 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SMC3Q9UQE7 1217 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 ST14Q9Y5Y6 855 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 BZW2Q9Y6E2 419 aaKnown RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 MORC2Q9Y6X9 1032 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 KIAA1324LA8MWY0 1029 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 LSM1O15116 133 aaKnown RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 HPDP32754 393 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SH3BGRP55822 239 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 KRT85P78386 507 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 OLFML1Q6UWY5 402 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 RINLQ6ZS11 566 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 ZAR1Q86SH2 424 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 ZSWIM2Q8NEG5 633 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 RASSF8Q8NHQ8 419 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 B4GALNT2Q8NHY0 566 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 TCP11Q8WWU5 503 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 MEGF10Q96KG7 1140 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CAPZA3Q96KX2 299 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CFAP53Q96M91 514 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 HELLSQ9NRZ9 838 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 NRBP1Q9UHY1 535 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 ADAM21Q9UKJ8 722 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 STK38LQ9Y2H1 464 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 FAN1Q9Y2M0 1017 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CTDP1Q9Y5B0 961 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 USP16Q9Y5T5 823 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CETN3O15182 167 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SIGLEC6O43699 453 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 KINO60870 393 aaKnown RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 C6orf222P0C671 652 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 PNMA6AP0CW24 399 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 XBP1P17861 261 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 PREPP48147 710 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SCNN1BP51168 640 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 OXCT1P55809 520 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 RWDD2BP57060 319 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SESN3P58005 492 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 FOXO4P98177 505 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 MYO1EQ12965 1108 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 LAMB3Q13751 1172 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CCDC6Q16204 474 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 HSP90AA5PQ58FG0 334 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 THEMIS2Q5TEJ8 643 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 E4F1Q66K89 784 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CCDC73Q6ZRK6 1079 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 PODNQ7Z5L7 613 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 UBE3DQ7Z6J8 389 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SMYD4Q8IYR2 804 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-214ENST00000471247 DAGLBQ8NCG7 672 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 CABS1Q96KC9 395 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 TSC22D3Q99576 134 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 SLC4A7Q9Y6M7 1214 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 WDFY3Q8IZQ1 3526 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 TSC2P49815 1807 aa3.16□□□□□ -1.9
CCNL1-214ENST00000471247 MICAL3Q7RTP6 2002 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 FAM221BA6H8Z2 402 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 TULP2O00295 520 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 CBFA2T2O43439 604 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 DDHD2O94830 711 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 IGKV5-2P06315 115 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 PDHA1P08559 390 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 HOXC12P31275 282 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 IRX1P78414 480 aaPredicted RBP3.15□□□□□ -1.9
CCNL1-214ENST00000471247 GPR162Q16538 588 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 PTPN21Q16825 1174 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 RSPO4Q2I0M5 234 aaPredicted RBP3.15□□□□□ -1.9
CCNL1-214ENST00000471247 SLC10A6Q3KNW5 377 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 KBTBD12Q3ZCT8 623 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 CFAP100Q494V2 611 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 TRAPPC3LQ5T215 181 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 RNF43Q68DV7 783 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 CEP85Q6P2H3 762 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 UTS2BQ765I0 119 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 CNNM3Q8NE01 707 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 COPS5Q92905 334 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 SNX21Q969T3 373 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 ELMO3Q96BJ8 720 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 MISP3Q96FF7 219 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 ERO1AQ96HE7 468 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 TTC14Q96N46 770 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 ZC3H12CQ9C0D7 883 aaKnown RBP3.15□□□□□ -1.9
CCNL1-214ENST00000471247 USP44Q9H0E7 712 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 NUP62CLQ9H1M0 184 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 WHRNQ9P202 907 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 MCM8Q9UJA3 840 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 PPT2Q9UMR5 302 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 LZTS1Q9Y250 596 aa3.15□□□□□ -1.9
CCNL1-214ENST00000471247 ZSCAN12O43309 604 aa3.15□□□□□ -1.91
CCNL1-214ENST00000471247 MAFO75444 373 aaPredicted RBP3.15□□□□□ -1.91
CCNL1-214ENST00000471247 REC8O95072 547 aa3.15□□□□□ -1.91
CCNL1-214ENST00000471247 PGRP06401 933 aa3.15□□□□□ -1.91
CCNL1-214ENST00000471247 PHKG2P15735 406 aa3.15□□□□□ -1.91
CCNL1-214ENST00000471247 CYP2C19P33261 490 aa3.15□□□□□ -1.91
CCNL1-214ENST00000471247 EIF5P55010 431 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms