RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 STK4Q13043 487 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 GIT2Q14161 759 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 TPD52L1Q16890 204 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 FILIP1LQ4L180 1135 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 ARSHQ5FYA8 562 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 XKR3Q5GH77 459 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 HERC4Q5GLZ8 1057 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 RINT1Q6NUQ1 792 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CXCL17Q6UXB2 119 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 TPH2Q8IWU9 490 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 ZC3H3Q8IXZ2 948 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 RETREG2Q8NC44 543 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 KIAA0895Q8NCT3 520 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 MCPH1Q8NEM0 835 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 STAMQ92783 540 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 GJA10Q969M2 543 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 HVCN1Q96D96 273 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 FGD4Q96M96 766 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CEP63Q96MT8 703 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 CCDC43Q96MW1 224 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 PLIN2Q99541 437 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 FANCLQ9NW38 375 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 RGL1Q9NZL6 768 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 LARSQ9P2J5 1176 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 LIMA1Q9UHB6 759 aaKnown RBP10.1□□□□□ -0.79
PTPRE-207ENST00000471218 PCDHA2Q9Y5H9 948 aa10.1□□□□□ -0.79
PTPRE-207ENST00000471218 A0A1B0GTH6 734 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 PDXKO00764 312 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CHMP2AO43633 222 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 NRDCO43847 1150 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 ATP9AO75110 1047 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 DGAT1O75907 488 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 SERPINC1P01008 464 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 SSBP05455 408 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 ATP2A2P16615 1042 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 UBA1P22314 1058 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CASP1P29466 404 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 PBX2P40425 430 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 RARRES1P49788 294 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 UBASH3AP57075 661 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 ACTR2P61160 394 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 PTPN11Q06124 597 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 PPP2R3AQ06190 1150 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 BFSP2Q13515 415 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 TRIM14Q14142 442 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CTTNQ14247 550 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 TTLL4Q14679 1199 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 ZCWPW2Q504Y3 356 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 FAM160B1Q5W0V3 765 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 EPM2AIP1Q7L775 607 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 OTOP2Q7RTS6 562 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CCDC150Q8NCX0 1101 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 FAM122AQ96E09 287 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 SLC9A7Q96T83 725 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 REEP2Q9BRK0 252 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 NOC4LQ9BVI4 516 aaKnown RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 KATNBL1Q9H079 304 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 MAGEC2Q9UBF1 373 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 CTNND2Q9UQB3 1225 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 SAMM50Q9Y512 469 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
PTPRE-207ENST00000471218 MAFBQ9Y5Q3 323 aaPredicted RBP10.09□□□□□ -0.79
PTPRE-207ENST00000471218 ITIH6Q6UXX5 1313 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 EMSYQ7Z589 1322 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 GRXCR1A8MXD5 290 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 FAM13AO94988 1023 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 PTMAP06454 111 aaKnown RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 RFC5P40937 340 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 PSMC6P62333 389 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 FKBP3Q00688 224 aaKnown RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 BEX3Q00994 111 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 ENPEPQ07075 957 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 TCP11X2Q5H9J9 407 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 CELF3Q5SZQ8 465 aaKnown RBP10.08□□□□□ -0.8
PTPRE-207ENST00000471218 KLHL10Q6JEL2 608 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 CCDC62Q6P9F0 684 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 PLPPR4Q7Z2D5 763 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 ZNF507Q8TCN5 953 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 SEPT1Q8WYJ6 367 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 MED15Q96RN5 788 aa10.08□□□□□ -0.8
PTPRE-207ENST00000471218 JPH2Q9BR39 696 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms