RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 NEDD9Q14511 834 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 ALX1Q15699 326 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 LRRC43Q8N309 656 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 SLC44A3Q8N4M1 653 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 ZBTB44Q8NCP5 570 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 NELL1Q92832 810 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
LSM2-210ENST00000470086 TMEM161AQ9NX61 479 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 WNT16Q9UBV4 365 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 PCDHA1Q9Y5I3 950 aa9.44□□□□□ -0.9
LSM2-210ENST00000470086 CLUHO75153 1309 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 ZBTB5O15062 677 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 RPS6KA5O75582 802 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 RFPL2O75678 378 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 SRFP11831 508 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 TDGF1P13385 188 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 ITGB5P18084 799 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 CD72P21854 359 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 CLCN4P51793 760 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 FAM189BP81408 668 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 KRT76Q01546 638 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 CCDC6Q16204 474 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 KIZQ2M2Z5 673 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 LETM2Q2VYF4 491 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 SLC24A5Q71RS6 500 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 VPS52Q8N1B4 723 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 ZNF668Q96K58 619 aaPredicted RBP9.43□□□□□ -0.9
LSM2-210ENST00000470086 TTC14Q96N46 770 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 SFXN1Q9H9B4 322 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 ERAP1Q9NZ08 941 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 SPG21Q9NZD8 308 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 SIT1Q9Y3P8 196 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 PCDHA2Q9Y5H9 948 aa9.43□□□□□ -0.9
LSM2-210ENST00000470086 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 DENND3A2RUS2 1198 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 GCOM1H8Y6P7 765 aaPredicted RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 SLC30A4O14863 429 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 SPTLC1O15269 473 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 CXCL14O95715 111 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 VTNP04004 478 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 POLR2MP0CAP2 368 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 FGFR4P22455 802 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 PRSS12P56730 875 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 BCAR1P56945 870 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 LMNB2Q03252 620 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 CSTF1Q05048 431 aaKnown RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 NMIQ13287 307 aaPredicted RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 HTR4Q13639 388 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 GNPTABQ3T906 1256 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 ATAT1Q5SQI0 421 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 IER5Q5VY09 327 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 MTHFD1LQ6UB35 978 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 PIBF1Q8WXW3 757 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 ZNF707Q96C28 371 aaPredicted RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 ATP6V0A4Q9HBG4 840 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
LSM2-210ENST00000470086 RXFP3Q9NSD7 469 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 KIAA1468Q9P260 1216 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 DNAJB4Q9UDY4 337 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 NUMBLQ9Y6R0 609 aa9.42□□□□□ -0.9
LSM2-210ENST00000470086 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 TTC41PQ6P2S7 1318 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 SMIM35A0A1B0GVV1 85 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 KLRF2D3W0D1 207 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 MEIS2O14770 477 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 GPR32O75388 356 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
LSM2-210ENST00000470086 CNPP09543 421 aaKnown RBP9.41□□□□□ -0.9
LSM2-210ENST00000470086 CTSAP10619 480 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 GBP2P32456 591 aaPredicted RBP9.41□□□□□ -0.9
LSM2-210ENST00000470086 PPM1AP35813 382 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 SEC23AQ15436 765 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 N4BP2L1Q5TBK1 243 aaPredicted RBP9.41□□□□□ -0.9
LSM2-210ENST00000470086 PCNX4Q63HM2 1172 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 DCLRE1AQ6PJP8 1040 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 CYB5R4Q7L1T6 521 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 OTOP3Q7RTS5 596 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 ZNF598Q86UK7 904 aaKnown RBP9.41□□□□□ -0.9
LSM2-210ENST00000470086 CABP7Q86V35 215 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 DGKHQ86XP1 1220 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 ECHDC2Q86YB7 292 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 KIAA0319LQ8IZA0 1049 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 RNF169Q8NCN4 708 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 GLG1Q92896 1179 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 FGF14Q92915 247 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 LPPQ93052 612 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
LSM2-210ENST00000470086 SENP7Q9BQF6 1050 aa9.41□□□□□ -0.9
LSM2-210ENST00000470086 DDX23Q9BUQ8 820 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms