RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 GCNT3O95395 438 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PLS3P13797 630 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 SYN1P17600 705 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 CASP1P29466 404 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 ABCD1P33897 745 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 CDC42EP1Q00587 391 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 DPYDQ12882 1025 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 COASYQ13057 564 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GIT2Q14161 759 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 TARBP2Q15633 366 aaKnown RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 TMEM132AQ24JP5 1023 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 TRIM60Q495X7 471 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 HABP4Q5JVS0 413 aaKnown RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 FAM26FQ5R3K3 315 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 C1orf53Q5VUE5 145 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 SH3RF1Q7Z6J0 888 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 SESTD1Q86VW0 696 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 SFR1Q86XK3 245 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 RHPN2Q8IUC4 686 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 LRRC15Q8TF66 581 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PPP1R13LQ8WUF5 828 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 NLRP4Q96MN2 994 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GZF1Q9H116 711 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 MRPL44Q9H9J2 332 aaKnown RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 C17orf75Q9HAS0 396 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GPRC5CQ9NQ84 441 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 TMEM63CQ9P1W3 806 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 KIAA1468Q9P260 1216 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PRKAG2Q9UGJ0 569 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 DACH1Q9UI36 760 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 COLQQ9Y215 455 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GINS2Q9Y248 185 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 ATP11BQ9Y2G3 1177 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 CEP290O15078 2479 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PHLPP2Q6ZVD8 1323 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 RSPH10B2B2RC85 870 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ZBTB42B2RXF5 422 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 BIN1O00499 593 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ASAP2O43150 1006 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 TREHO43280 583 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 RSPH10BP0C881 870 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 CCDC192P0DO97 292 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 NAMPTP43490 491 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PHKA2P46019 1235 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PEX3P56589 373 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 STRN3Q13033 797 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PSMD2Q13200 908 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PTK7Q13308 1070 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ALCAMQ13740 583 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 KCNB1Q14721 858 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 STX1AQ16623 288 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 SLC39A5Q6ZMH5 540 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 TRIML1Q8N9V2 468 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ERCC4Q92889 916 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-216ENST00000468949 BICD1Q96G01 975 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PPP1R16BQ96T49 567 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 C2orf40Q9H1Z8 148 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PRO3102Q9H379 93 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 KMT5AQ9NQR1 393 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 XPNPEP1Q9NQW7 623 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 TRMT13Q9NUP7 481 aaKnown RBP8.96□□□□□ -0.98
HDAC6-216ENST00000468949 TBC1D7Q9P0N9 293 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PCDHA5Q9Y5H7 936 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 PCDHA2Q9Y5H9 948 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 ARID2Q68CP9 1835 aa8.96□□□□□ -0.98
HDAC6-216ENST00000468949 SYCE3A1L190 88 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 MBLAC1A4D2B0 266 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SFI1A8K8P3 1242 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ATMINO43313 823 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 B4GALT4O60513 344 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ERLIN2O94905 339 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 VTNP04004 478 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 CTSHP09668 335 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SRGAP2CP0DJJ0 459 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SCP2P22307 547 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 THPOP40225 353 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 PPP1R2P41236 205 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 MAGEA10P43363 369 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF200P98182 395 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 NCBP1Q09161 790 aaKnown RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 LAMTOR4Q0VGL1 99 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 BFSP2Q13515 415 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ZSCAN23Q3MJ62 389 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 RUFY4Q6ZNE9 571 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ZNF410Q86VK4 478 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 SYCP3Q8IZU3 236 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 NME8Q8N427 588 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 RNF149Q8NC42 400 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 CAGE1Q8TC20 777 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 DNAJB3Q8WWF6 145 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 PRPF31Q8WWY3 499 aaKnown RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 DNAJC19Q96DA6 116 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 ZBTB10Q96DT7 871 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 GDF15Q99988 308 aa8.95□□□□□ -0.98
HDAC6-216ENST00000468949 LBHD1Q9BQE6 289 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-216ENST00000468949 GCOM2Q9BZD3 368 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms