RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SCLT1Q96NL6 688 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-203ENST00000468565 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 REV3LO60673 3130 aa16.14■□□□□ 0.17
COL27A1-203ENST00000468565 C9IYK1 514 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 C5orf67F2Z3F1 127 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 H3BNC9 293 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 STX6O43752 255 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 GAS2O43903 313 aaKnown RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 LINC00271P0C7V0 271 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 PDIA4P13667 645 aaKnown RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 BTG3Q14201 252 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 TTC38Q5R3I4 469 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 TPH2Q8IWU9 490 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 MICALL1Q8N3F8 863 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 CLP1Q92989 425 aaKnown RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 GCOM2Q9BZD3 368 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 RB1P06400 928 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 FAM189BP81408 668 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 ZNF579Q8NAF0 562 aaKnown RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 ZNF668Q96K58 619 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 ELAC1Q9H777 363 aaKnown RBP16.13■□□□□ 0.17
COL27A1-203ENST00000468565 THEGQ9P2T0 379 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 PCDHB7Q9Y5E2 793 aa16.13■□□□□ 0.17
COL27A1-203ENST00000468565 SYT1P21579 422 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 ZNF174Q15697 407 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 GLIPR1L2Q4G1C9 344 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 RHPN2Q8IUC4 686 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 INO80BQ9C086 356 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-203ENST00000468565 PRDM6Q9NQX0 595 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 ANKEF1Q9NU02 776 aa16.12■□□□□ 0.17
COL27A1-203ENST00000468565 A0A087WZ62 844 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 POTEMA6NI47 508 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 GJB2P29033 226 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 BMPR1AP36894 532 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 GPM6BQ13491 265 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 EMC2Q15006 297 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 ATXN2LQ8WWM7 1075 aaKnown RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 TCP11Q8WWU5 503 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 SYAP1Q96A49 352 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 TUFT1Q9NNX1 390 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 COL4A3BPQ9Y5P4 624 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 CTNNB1P35222 781 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 PTPROQ16827 1216 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 PSPC1Q8WXF1 523 aaKnown RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 MRPL38Q96DV4 380 aaKnown RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 C11orf84Q9BUA3 381 aaPredicted RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 PLVAPQ9BX97 442 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
COL27A1-203ENST00000468565 BRWD1Q9NSI6 2320 aa16.11■□□□□ 0.17
COL27A1-203ENST00000468565 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 ZBTB39O15060 712 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 F13A1P00488 732 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 TMEM87AQ8NBN3 555 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 MTRQ99707 1265 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 ATP6V0A4Q9HBG4 840 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 PLXNA4Q9HCM2 1894 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
COL27A1-203ENST00000468565 ASAP2O43150 1006 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 DGAT1O75907 488 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 SPATA31C1P0DKV0 1188 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 TECP42680 631 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 TOB1P50616 345 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 TPRNQ4KMQ1 711 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 KSR1Q8IVT5 923 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 C4orf32Q8N8J7 132 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 POLR3CQ9BUI4 534 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 LMAN2LQ9H0V9 348 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 IFT122Q9HBG6 1241 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 MYO7AQ13402 2215 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 HOXA2O43364 376 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 FGFR4P22455 802 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 RARRES1P49788 294 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 GATMP50440 423 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.173e-7■□□□□ 11.3
COL27A1-203ENST00000468565 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 CATSPER3Q86XQ3 398 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 P2RX5Q93086 422 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
COL27A1-203ENST00000468565 TRAIPQ9BWF2 469 aa16.09■□□□□ 0.17
COL27A1-203ENST00000468565 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms