RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 VTNP04004 478 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 FOSL2P15408 326 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 TMOD1P28289 359 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-205ENST00000468338 DRP2Q13474 957 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 CUL4AQ13619 759 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 LRRC71Q8N4P6 559 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 C4orf32Q8N8J7 132 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 LXNQ9BS40 222 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
COL4A6-205ENST00000468338 ZSWIM4Q9H7M6 989 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-205ENST00000468338 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
COL4A6-205ENST00000468338 KIF3AQ9Y496 699 aa12.49□□□□□ -0.41
COL4A6-205ENST00000468338 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 EIF4BP23588 611 aaKnown RBP12.48□□□□□ -0.41
COL4A6-205ENST00000468338 MCM7P33993 719 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 GPC3P51654 580 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 NLRP11P59045 1033 aaKnown RBP12.48□□□□□ -0.41
COL4A6-205ENST00000468338 ERVK-21P61565 698 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 CDC42EP1Q00587 391 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 PAK2Q13177 524 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 KIZQ2M2Z5 673 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 TSC1Q92574 1164 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 OSMRQ99650 979 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 EIF2AK1Q9BQI3 630 aaKnown RBP12.48□□□□□ -0.41
COL4A6-205ENST00000468338 SH2D3AQ9BRG2 576 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 PCDHGC3Q9UN70 934 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 ST3GAL5Q9UNP4 418 aa12.48□□□□□ -0.41
COL4A6-205ENST00000468338 GPR182O15218 404 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 MGEA5O60502 916 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 LPXNO60711 386 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 ATP2B1P20020 1258 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 GJB2P29033 226 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 TXKP42681 527 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 NPEPPSP55786 919 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 CTTNQ14247 550 aaKnown RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 DSC3Q14574 896 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 ZNF174Q15697 407 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 ODR4Q5SWX8 454 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 FAM117BQ6P1L5 589 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 ZNF689Q96CS4 500 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 AKT3Q9Y243 479 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 GINS2Q9Y248 185 aa12.47□□□□□ -0.41
COL4A6-205ENST00000468338 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-205ENST00000468338 POTEMA6NI47 508 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 C9IYK1 514 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 ZBTB39O15060 712 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 DGKIO75912 1065 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 UPP2O95045 317 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 LINC00271P0C7V0 271 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL4A6-205ENST00000468338 DARSP14868 501 aaKnown RBP12.46□□□□□ -0.41
COL4A6-205ENST00000468338 FAM189BP81408 668 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 CYP4A11Q02928 519 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 NFX1Q12986 1120 aaKnown RBP12.46□□□□□ -0.41
COL4A6-205ENST00000468338 OTUD6AQ7L8S5 288 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.41
COL4A6-205ENST00000468338 RGS18Q9NS28 235 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.41
COL4A6-205ENST00000468338 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
COL4A6-205ENST00000468338 ARID2Q68CP9 1835 aa12.46□□□□□ -0.42
COL4A6-205ENST00000468338 RFXAPO00287 272 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
COL4A6-205ENST00000468338 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
COL4A6-205ENST00000468338 DNM2P50570 870 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 SLC24A5Q71RS6 500 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 NPAS4Q8IUM7 802 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 SLC7A3Q8WY07 619 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 CLP1Q92989 425 aaKnown RBP12.45□□□□□ -0.42
COL4A6-205ENST00000468338 PPP1R16BQ96T49 567 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 YME1L1Q96TA2 773 aa12.45□□□□□ -0.42
COL4A6-205ENST00000468338 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms