RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PTPROQ16827 1216 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 KLHL23Q8NBE8 558 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 ERMNQ8TAM6 284 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 ASAP3Q8TDY4 903 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 C11orf84Q9BUA3 381 aaPredicted RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 LRWD1Q9UFC0 647 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 PIN4Q9Y237 131 aaKnown RBP12.86□□□□□ -0.35
CDHR3-205ENST00000468143 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
CDHR3-205ENST00000468143 COL6A3P12111 3177 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 A0A0U1RQF3 1178 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 PP2D1A8MPX8 630 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 ASAP2O43150 1006 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 DGAT1O75907 488 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 RPA1P27694 616 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 CDC25AP30304 524 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 TWF2Q6IBS0 349 aaKnown RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 LPPQ93052 612 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 HLA-CQ95604 372 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 CASD1Q96PB1 797 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 ASB2Q96Q27 587 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 POLD4Q9HCU8 107 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 CHST12Q9NRB3 414 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 PLAGL2Q9UPG8 496 aa12.85□□□□□ -0.35
CDHR3-205ENST00000468143 COL4A4P53420 1690 aaPredicted RBP12.85□□□□□ -0.35
CDHR3-205ENST00000468143 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
CDHR3-205ENST00000468143 ITGB1P05556 798 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 GLRA2P23416 452 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 DNAJB1P25685 340 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 ARL2P36404 184 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 KCNQ1P51787 676 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 CUL4AQ13619 759 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 CAPSQ13938 189 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 RILPL1Q5EBL4 403 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 CLLU1OSQ5K130 101 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 LRRC55Q6ZSA7 311 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 ABI1Q8IZP0 508 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
CDHR3-205ENST00000468143 CWH43Q9H720 699 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
CDHR3-205ENST00000468143 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 TTC3P53804 2025 aa12.84□□□□□ -0.35
CDHR3-205ENST00000468143 CHD9Q3L8U1 2897 aa12.83□□□□□ -0.35
CDHR3-205ENST00000468143 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 MEIS3P2A8K0S8 358 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 EOMESO95936 686 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PBX3P40426 434 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PHKA2P46019 1235 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 CAMK1Q14012 370 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 TFDP1Q14186 410 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PDIA5Q14554 519 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 DTHD1Q6ZMT9 781 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
CDHR3-205ENST00000468143 COLGALT1Q8NBJ5 622 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 POF1BQ8WVV4 589 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 CPB2Q96IY4 423 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PLVAPQ9BX97 442 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 COG5Q9UP83 839 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.36
CDHR3-205ENST00000468143 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
CDHR3-205ENST00000468143 E9PMD0 336 aa12.82□□□□□ -0.36
CDHR3-205ENST00000468143 HOXA2O43364 376 aa12.82□□□□□ -0.36
CDHR3-205ENST00000468143 ERLIN2O94905 339 aa12.82□□□□□ -0.36
CDHR3-205ENST00000468143 HOXA11P31270 313 aaPredicted RBP12.82□□□□□ -0.36
CDHR3-205ENST00000468143 IRS1P35568 1242 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms