RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 ECM1Q16610 540 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 HAUS3Q68CZ6 603 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 ZNF598Q86UK7 904 aaKnown RBP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 FBXO22Q8NEZ5 403 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 ERMNQ8TAM6 284 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 PRPF31Q8WWY3 499 aaKnown RBP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 SNX21Q969T3 373 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 INO80BQ9C086 356 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 MINDY3Q9H8M7 445 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 CHST12Q9NRB3 414 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 RNF19AQ9NV58 838 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-215ENST00000468018 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
ATG4B-215ENST00000468018 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 RB1P06400 928 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 ATF7P17544 494 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 GATMP50440 423 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 ECHDC2Q86YB7 292 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 SLC17A8Q8NDX2 589 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 NLRP4Q96MN2 994 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 SCLT1Q96NL6 688 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 NACC1Q96RE7 527 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.29
ATG4B-215ENST00000468018 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
ATG4B-215ENST00000468018 VCANP13611 3396 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 A0A087WWV3 80 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 ZSCAN20P17040 1043 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-215ENST00000468018 BMPR1AP36894 532 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 PTENP60484 403 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-215ENST00000468018 FAM102BQ5T8I3 360 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 BRAPQ7Z569 592 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 ASAP3Q8TDY4 903 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 MMTAG2Q9BU76 263 aaKnown RBP16.88■□□□□ 0.29
ATG4B-215ENST00000468018 PLVAPQ9BX97 442 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 NFKBIZQ9BYH8 718 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 AGPAT5Q9NUQ2 364 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 DACT1Q9NYF0 836 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
ATG4B-215ENST00000468018 EOMESO95936 686 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 PDCP20941 246 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 GLRA2P23416 452 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 CAPSQ13938 189 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 PCBP1Q15365 356 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATG4B-215ENST00000468018 ARL6IP4Q66PJ3 421 aaKnown RBP16.87■□□□□ 0.29
ATG4B-215ENST00000468018 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 P2RX5Q93086 422 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 MRPL38Q96DV4 380 aaKnown RBP16.87■□□□□ 0.29
ATG4B-215ENST00000468018 RAB34Q9BZG1 259 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 PRDM6Q9NQX0 595 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
ATG4B-215ENST00000468018 ZNF623O75123 536 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 SYT1P21579 422 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-215ENST00000468018 PHKA2P46019 1235 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 GPM6BQ13491 265 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 CCDC85BQ15834 202 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-215ENST00000468018 NAALADL2Q58DX5 795 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 HYIQ5T013 277 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 DTHD1Q6ZMT9 781 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 CASD1Q96PB1 797 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
ATG4B-215ENST00000468018 TDRD15B5MCY1 1934 aaKnown RBP16.86■□□□□ 0.29
ATG4B-215ENST00000468018 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 PP2D1A8MPX8 630 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 HOXA2O43364 376 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
ATG4B-215ENST00000468018 SRGAP2CP0DJJ0 459 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 FGFR1P11362 822 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CYP11B2P19099 503 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CTNNB1P35222 781 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CCT6AP40227 531 aaKnown RBP16.85■□□□□ 0.29
ATG4B-215ENST00000468018 AMHR2Q16671 573 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 PAN2Q504Q3 1202 aaKnown RBP16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CLLU1OSQ5K130 101 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CATSPER4Q7RTX7 472 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 SNX29Q8TEQ0 813 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 C11orf84Q9BUA3 381 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-215ENST00000468018 LMAN2LQ9H0V9 348 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 CWH43Q9H720 699 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 FAM105AQ9NUU6 356 aa16.85■□□□□ 0.29
ATG4B-215ENST00000468018 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
ATG4B-215ENST00000468018 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 MBTD1Q05BQ5 628 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 CAMK1Q14012 370 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 TFDP1Q14186 410 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 CDCA2Q69YH5 1023 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-215ENST00000468018 PADI6Q6TGC4 694 aa16.84■□□□□ 0.29
ATG4B-215ENST00000468018 LRRC55Q6ZSA7 311 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms