RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SPATA31C2B4DYI2 1134 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 ZNF806P0C7X5 589 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 TCF7P36402 384 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 BCAR1P56945 870 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 C19orf57Q0VDD7 668 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 WTAPQ15007 396 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 GET4Q7L5D6 327 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 SMG7Q92540 1137 aaKnown RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 PHKBQ93100 1093 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 PIDD1Q9HB75 910 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 PCDHA2Q9Y5H9 948 aa13.48□□□□□ -0.25
VPS26A-204ENST00000467852 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-204ENST00000467852 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 INPPL1O15357 1258 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 HRO43593 1189 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 STAM2O75886 525 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
VPS26A-204ENST00000467852 GOLGA8HP0CJ92 632 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 CTDSPL2Q05D32 466 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 ADCY1Q08828 1119 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 ZNF852Q6ZMS4 543 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
VPS26A-204ENST00000467852 RPP25Q9BUL9 199 aaKnown RBP13.47□□□□□ -0.25
VPS26A-204ENST00000467852 CPVLQ9H3G5 476 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
VPS26A-204ENST00000467852 GIPC1O14908 333 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
VPS26A-204ENST00000467852 FIBPO43427 364 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 INSRRP14616 1297 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 CCR3P51677 355 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 CCDC6Q16204 474 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 CEP68Q76N32 757 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 SAMD3Q8N6K7 520 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-204ENST00000467852 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
VPS26A-204ENST00000467852 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 RNF19AQ9NV58 838 aa13.46□□□□□ -0.25
VPS26A-204ENST00000467852 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 M0R2C6 588 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 AXIN1O15169 862 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
VPS26A-204ENST00000467852 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-204ENST00000467852 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
VPS26A-204ENST00000467852 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-204ENST00000467852 GHRHRQ02643 423 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 COL28A1Q2UY09 1125 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 SEPT1Q8WYJ6 367 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 FGF14Q92915 247 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 TTC14Q96N46 770 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 BBC3Q96PG8 261 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-204ENST00000467852 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 CACNA2D2Q9NY47 1150 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
VPS26A-204ENST00000467852 ORC4O43929 436 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 FZD5Q13467 585 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 PARM1Q6UWI2 310 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-204ENST00000467852 CHRDQ9H2X0 955 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 MTCL1Q9Y4B5 1905 aaKnown RBP13.44□□□□□ -0.26
VPS26A-204ENST00000467852 MYO18BQ8IUG5 2567 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 ASXL3Q9C0F0 2248 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 EVPLQ92817 2033 aa13.44□□□□□ -0.26
VPS26A-204ENST00000467852 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 ZC3H11AO75152 810 aaKnown RBP eCLIP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 PPP1R37O75864 691 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 SEC24BO95487 1268 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 CXCL12P48061 93 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 FNTBP49356 437 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 SRSF5Q13243 272 aaKnown RBP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 SEMA3FQ13275 785 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 PROSER1Q86XN7 944 aa13.43□□□□□ -0.26
VPS26A-204ENST00000467852 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
VPS26A-204ENST00000467852 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms