RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 COL18A1P39060 1754 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 COL5A2P05997 1499 aaPredicted RBP5.7□□□□□ -1.5
CDK13-203ENST00000465643 LMO7Q8WWI1 1683 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 RASSF10A6NK89 507 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 EFEMP2O95967 443 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 NTRK1P04629 796 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 SRSF2Q01130 221 aaKnown RBP5.7□□□□□ -1.5
CDK13-203ENST00000465643 HDAC1Q13547 482 aaPredicted RBP5.7□□□□□ -1.5
CDK13-203ENST00000465643 BRD3Q15059 726 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 VPS72Q15906 364 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 RALGPS1Q5JS13 557 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 CATIPQ7Z7H3 387 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 DLG3Q92796 817 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 DCAF5Q96JK2 942 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 SLC6A20Q9NP91 592 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 MSRAQ9UJ68 235 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 ABCC6O95255 1503 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 RGPD5Q99666 1765 aa5.7□□□□□ -1.5
CDK13-203ENST00000465643 APAF1O14727 1248 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 HIP1RO75146 1068 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 U2AF1L5P0DN76 240 aaPredicted RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 HOXA10P31260 410 aaPredicted RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 IL13P35225 146 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 GATA4P43694 442 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 U2AF1Q01081 240 aaKnown RBP eCLIP5.69□□□□□ -1.5
CDK13-203ENST00000465643 CT83Q5H943 113 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 C10orf62Q5T681 223 aaPredicted RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 METTL22Q9BUU2 404 aaPredicted RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 ADAMTS10Q9H324 1103 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 RXFP1Q9HBX9 757 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 DNAJC28Q9NX36 388 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 SIT1Q9Y3P8 196 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 NWD2Q9ULI1 1742 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 BCL9LQ86UU0 1499 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 CRB1P82279 1406 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 HMOX1P09601 288 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 AOC3Q16853 763 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 CCDC184Q52MB2 194 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 FIGNQ5HY92 759 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 TOR2AQ5JU69 321 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 CATSPEREQ5SY80 951 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 SULT6B1Q6IMI4 303 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 B3GNT9Q6UX72 402 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 UHMK1Q8TAS1 419 aaKnown RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 SCYL1Q96KG9 808 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 ARPC5LQ9BPX5 153 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 PLCD4Q9BRC7 762 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 QRSL1Q9H0R6 528 aaKnown RBP5.69□□□□□ -1.5
CDK13-203ENST00000465643 COMMD10Q9Y6G5 202 aa5.69□□□□□ -1.5
CDK13-203ENST00000465643 SPATA31A5Q5VU36 1347 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 FRMPD2Q68DX3 1309 aaPredicted RBP5.68□□□□□ -1.5
CDK13-203ENST00000465643 SPATA31A7Q8IWB4 1347 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 TMEM265A0A087WTH1 108 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 AP1G1O43747 822 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 HLTFQ14527 1009 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDK13-203ENST00000465643 COBLL1Q53SF7 1204 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 RAPGEF4Q8WZA2 1011 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 SARGQ9BW04 601 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 PRDM12Q9H4Q4 367 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 CARS2Q9HA77 564 aaKnown RBP5.68□□□□□ -1.5
CDK13-203ENST00000465643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDK13-203ENST00000465643 SERPINB13Q9UIV8 391 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 ATP23Q9Y6H3 246 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 NRAPQ86VF7 1730 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 ATRNO75882 1429 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 SPATA31A1Q5TZJ5 1347 aa5.68□□□□□ -1.5
CDK13-203ENST00000465643 COL3A1P02461 1466 aaPredicted RBP5.68□□□□□ -1.5
CDK13-203ENST00000465643 A6NNZ2 444 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 CCER2I3L3R5 266 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 TRIM27P14373 513 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 ENDOUP21128 410 aaKnown RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 C5AR1P21730 350 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 RTP1P59025 263 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 KRT85P78386 507 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 MVKQ03426 396 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 BNIP3Q12983 259 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 GTF2H3Q13889 308 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 HSF5Q4G112 596 aaPredicted RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 RRP12Q5JTH9 1297 aaKnown RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 IFIT1BQ5T764 474 aaKnown RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 GPR158Q5T848 1215 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 FAM9BQ8IZU0 186 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 ERCC4Q92889 916 aaPredicted RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 EAF2Q96CJ1 260 aaPredicted RBP5.67□□□□□ -1.5
CDK13-203ENST00000465643 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 TNFRSF10DQ9UBN6 386 aa5.67□□□□□ -1.5
CDK13-203ENST00000465643 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms