RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 AOX1Q06278 1338 aa3.7□□□□□ -1.82
CD46-210ENST00000462968 CFAP54Q96N23 3096 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 LAMB1P07942 1786 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 WDFY4Q6ZS81 3184 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 TRIM43BA6NCK2 446 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 TCP10L2B9ZVM9 353 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 DNM1LO00429 736 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 HTR3BO95264 441 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 ASGR2P07307 311 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 MAPK1P28482 360 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 MC3RP41968 323 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 SARSP49591 514 aaKnown RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 EPHB4P54760 987 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 FKBP1AP62942 108 aaKnown RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 CACNB2Q08289 660 aaPredicted RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 AIMP1Q12904 312 aaKnown RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 DCTN1Q14203 1278 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 FAM110CQ1W6H9 321 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 PROSER3Q2NL68 480 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 DCAF15Q66K64 600 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 SLC39A5Q6ZMH5 540 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 CCDC129Q6ZRS4 1044 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 USP51Q70EK9 711 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 ANKRD13CQ8N6S4 541 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 CHST13Q8NET6 341 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 ZNF428Q96B54 188 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 TRIM43Q96BQ3 446 aaPredicted RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 PRRX2Q99811 253 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 TDRD3Q9H7E2 651 aaKnown RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 PANK3Q9H999 370 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 CD209Q9NNX6 404 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 PDLIM7Q9NR12 457 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 ST6GALNAC2Q9UJ37 374 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 MINPP1Q9UNW1 487 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 FAN1Q9Y2M0 1017 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 POLR3KQ9Y2Y1 108 aaPredicted RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 USP34Q70CQ2 3546 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 DDX60Q8IY21 1712 aaKnown RBP3.69□□□□□ -1.82
CD46-210ENST00000462968 SCN9AQ15858 1988 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 TAF1P21675 1872 aa3.69□□□□□ -1.82
CD46-210ENST00000462968 ZSWIM8A7E2V4 1837 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 RPAP1Q9BWH6 1393 aaPredicted RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 MSCO60682 206 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 NCAM1P13591 858 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 EIF2S2P20042 333 aaKnown RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 CYP2B6P20813 491 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 CCND3P30281 292 aaPredicted RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 PRKAR2BP31323 418 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 GBP1P32455 592 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 ID4P47928 161 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 PRR5P85299 388 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 ATP2B2Q01814 1243 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 FPGSQ05932 587 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 KLF10Q13118 480 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 KCTD2Q14681 263 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 RAB30Q15771 203 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 BNC2Q6ZN30 1099 aaPredicted RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 PHC3Q8NDX5 983 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 LPAR1Q92633 364 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 CDC5LQ99459 802 aaKnown RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 POLR3GLQ9BT43 218 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 ISCA1Q9BUE6 129 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 ZNF341Q9BYN7 854 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 VPS11Q9H270 941 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 SLC28A3Q9HAS3 691 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 NTMQ9P121 344 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 MSRAQ9UJ68 235 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 TLR6Q9Y2C9 796 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
CD46-210ENST00000462968 MYBBP1AQ9BQG0 1328 aaKnown RBP3.68□□□□□ -1.82
CD46-210ENST00000462968 GRXCR1A8MXD5 290 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 DCXO43602 365 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 PDE8AO60658 829 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 BPNT1O95861 308 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 ANXA1P04083 346 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 RAG1P15918 1043 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 ZKSCAN1P17029 563 aaPredicted RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 POU3F3P20264 500 aaPredicted RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 EIF4BP23588 611 aaKnown RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 CTSKP43235 329 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 GCLCP48506 637 aaPredicted RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 COL9A2Q14055 689 aaPredicted RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 TRIM60Q495X7 471 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 NOL9Q5SY16 702 aaKnown RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 CCDC174Q6PII3 467 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 GADL1Q6ZQY3 521 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 MIGA2Q7L4E1 593 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 FAM83AQ86UY5 434 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 ARRDC4Q8NCT1 418 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 PLBD2Q8NHP8 589 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 ADAMTS17Q8TE56 1095 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 SOCS4Q8WXH5 440 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 KISS1RQ969F8 398 aaPredicted RBP3.67□□□□□ -1.82
CD46-210ENST00000462968 NOX5Q96PH1 765 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 CDADC1Q9BWV3 514 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 ANKRD2Q9GZV1 360 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.67□□□□□ -1.82
CD46-210ENST00000462968 CHST7Q9NS84 486 aa3.67□□□□□ -1.82
CD46-210ENST00000462968 DDX20Q9UHI6 824 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms