RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 KRT79Q5XKE5 535 aa20.96■□□□□ 0.95
COL9A3-203ENST00000462700 ARL6IP4Q66PJ3 421 aaKnown RBP20.96■□□□□ 0.95
COL9A3-203ENST00000462700 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
COL9A3-203ENST00000462700 SAMD11Q96NU1 681 aa20.96■□□□□ 0.95
COL9A3-203ENST00000462700 ELAC1Q9H777 363 aaKnown RBP20.96■□□□□ 0.95
COL9A3-203ENST00000462700 TTC3P53804 2025 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 LPXNO60711 386 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 LINC00271P0C7V0 271 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 CDC25AP30304 524 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 ARL2P36404 184 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 RESTQ13127 1097 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 GRB10Q13322 594 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 SRGAP1Q7Z6B7 1085 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 CMTR2Q8IYT2 770 aaKnown RBP20.95■□□□□ 0.94
COL9A3-203ENST00000462700 ASAP3Q8TDY4 903 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 GDPD5Q8WTR4 605 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 CHST12Q9NRB3 414 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 DDX19AQ9NUU7 478 aaKnown RBP20.95■□□□□ 0.94
COL9A3-203ENST00000462700 TMEM161AQ9NX61 479 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 KIAA1024Q9UPX6 916 aa20.95■□□□□ 0.94
COL9A3-203ENST00000462700 COL4A4P53420 1690 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-203ENST00000462700 ARHGEF35A5YM69 484 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 VWA3AA6NCI4 1184 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 BMP15O95972 392 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 POU3F3P20264 500 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-203ENST00000462700 GATMP50440 423 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 EPC2Q52LR7 807 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 CATSPER4Q7RTX7 472 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 TMEM192Q8IY95 271 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 MCPH1Q8NEM0 835 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 FBXO22Q8NEZ5 403 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 MMTAG2Q9BU76 263 aaKnown RBP20.94■□□□□ 0.94
COL9A3-203ENST00000462700 POLR3FQ9H1D9 316 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-203ENST00000462700 MINDY3Q9H8M7 445 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 MTMR6Q9Y217 621 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 MTCH2Q9Y6C9 303 aa20.94■□□□□ 0.94
COL9A3-203ENST00000462700 STX6O43752 255 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 GTPBP6O43824 516 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-203ENST00000462700 GLRA2P23416 452 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 PHKA2P46019 1235 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 POU5F1BQ06416 359 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 CAPSQ13938 189 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 TFDP1Q14186 410 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 SF3A1Q15459 793 aaKnown RBP20.93■□□□□ 0.94
COL9A3-203ENST00000462700 PAN2Q504Q3 1202 aaKnown RBP20.93■□□□□ 0.94
COL9A3-203ENST00000462700 PADI6Q6TGC4 694 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 MAEAQ7L5Y9 396 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 ECHDC2Q86YB7 292 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 CLP1Q92989 425 aaKnown RBP20.93■□□□□ 0.94
COL9A3-203ENST00000462700 BHMT2Q9H2M3 363 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 GPRC5CQ9NQ84 441 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 AGPAT5Q9NUQ2 364 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 DACT1Q9NYF0 836 aa20.93■□□□□ 0.94
COL9A3-203ENST00000462700 PIN4Q9Y237 131 aaKnown RBP20.93■□□□□ 0.94
COL9A3-203ENST00000462700 A0A0U1RQF3 1178 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 CYP11B2P19099 503 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 PTENP60484 403 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 FAM102BQ5T8I3 360 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 IFNLR1Q8IU57 520 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-203ENST00000462700 TRAIPQ9BWF2 469 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 RWDD3Q9Y3V2 267 aa20.92■□□□□ 0.94
COL9A3-203ENST00000462700 MRPL42Q9Y6G3 142 aaKnown RBP20.92■□□□□ 0.94
COL9A3-203ENST00000462700 E9PMD0 336 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 FGFR1P11362 822 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 CTNNB1P35222 781 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 TWF2Q6IBS0 349 aaKnown RBP20.91■□□□□ 0.94
COL9A3-203ENST00000462700 PPM1EQ8WY54 764 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 NFKBIZQ9BYH8 718 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 DNM3Q9UQ16 869 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 TRANK1O15050 2925 aa20.91■□□□□ 0.94
COL9A3-203ENST00000462700 TBKBP1A7MCY6 615 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 C5orf67F2Z3F1 127 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 H3BNC9 293 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 EYA4O95677 639 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 HSP90AA1P07900 732 aaKnown RBP20.9■□□□□ 0.94
COL9A3-203ENST00000462700 ATF7P17544 494 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-203ENST00000462700 BMPR1AP36894 532 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 PCBP1Q15365 356 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL9A3-203ENST00000462700 HYIQ5T013 277 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 FAM173BQ6P4H8 233 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 ZNF598Q86UK7 904 aaKnown RBP20.9■□□□□ 0.94
COL9A3-203ENST00000462700 MICALL1Q8N3F8 863 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 AK8Q96MA6 479 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 ZSCAN16Q9H4T2 348 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-203ENST00000462700 RNF19AQ9NV58 838 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 LMCD1Q9NZU5 365 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 CLIC4Q9Y696 253 aa20.9■□□□□ 0.94
COL9A3-203ENST00000462700 INO80B-WBP1J3KQ70 363 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 HOXA2O43364 376 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 EOMESO95936 686 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 RB1P06400 928 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 MBTD1Q05BQ5 628 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 GPM6BQ13491 265 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
COL9A3-203ENST00000462700 CCDC85BQ15834 202 aaPredicted RBP20.89■□□□□ 0.93
COL9A3-203ENST00000462700 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 RNF169Q8NCN4 708 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 PNMA5Q96PV4 448 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 TMEM117Q9H0C3 514 aa20.89■□□□□ 0.93
COL9A3-203ENST00000462700 RALGAPA2Q2PPJ7 1873 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms