RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 GLB1L2Q8IW92 636 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 TP53I13Q8NBR0 393 aaPredicted RBP5.56□□□□□ -1.52
VPS41-210ENST00000462429 LCORQ96JN0 433 aaPredicted RBP5.56□□□□□ -1.52
VPS41-210ENST00000462429 WDR92Q96MX6 357 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 KATNBL1Q9H079 304 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 DPP7Q9UHL4 492 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 TCEAL9Q9UHQ7 104 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 ADAM29Q9UKF5 820 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 G3BP2Q9UN86 482 aaKnown RBP5.56□□□□□ -1.52
VPS41-210ENST00000462429 VWA7Q9Y334 891 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 CDY2AQ9Y6F7 541 aa5.56□□□□□ -1.52
VPS41-210ENST00000462429 DBX1A6NMT0 343 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 FZD9O00144 591 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 MTNR1BP49286 362 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 STAT5BP51692 787 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 SLURP1P55000 103 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 ANTXR2P58335 489 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 MCL1Q07820 350 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 KIAA2012Q0VF49 1180 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 USP10Q14694 798 aaKnown RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 KLHDC10Q6PID8 442 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 LMBR1LQ6UX01 489 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 KCNK18Q7Z418 384 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 ZNF761Q86XN6 746 aaPredicted RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 SLC41A1Q8IVJ1 513 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 LRRC56Q8IYG6 542 aaPredicted RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 BCL6BQ8N143 479 aaPredicted RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 GFM2Q969S9 779 aaKnown RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 HOOK2Q96ED9 719 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 PAWRQ96IZ0 340 aaKnown RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 IFT122Q9HBG6 1241 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 ZNF277Q9NRM2 450 aaPredicted RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 DNAI1Q9UI46 699 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 MAGEL2Q9UJ55 1249 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 INVSQ9Y283 1065 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 THRAP3Q9Y2W1 955 aaKnown RBP5.55□□□□□ -1.52
VPS41-210ENST00000462429 ZDHHC9Q9Y397 364 aa5.55□□□□□ -1.52
VPS41-210ENST00000462429 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 DAPK3O43293 454 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 MARCH6O60337 910 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 FSBPO95073 299 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 CELA3BP08861 270 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 OSMP13725 252 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 AGXTP21549 392 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 KCNC1P48547 511 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 GJA9P57773 515 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 CDK17Q00537 523 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 PIN1Q13526 163 aaPredicted RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 ANO4Q32M45 955 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 ZNF568Q3ZCX4 644 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 ZMAT1Q5H9K5 638 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 EFCAB2Q5VUJ9 269 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 MBNL2Q5VZF2 373 aaKnown RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 TRIM68Q6AZZ1 485 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 RALYLQ86SE5 291 aaKnown RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 SP8Q8IXZ3 490 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 LPPQ93052 612 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 OSBPL6Q9BZF3 934 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 PRDM12Q9H4Q4 367 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 LUC7LQ9NQ29 371 aaKnown RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS41-210ENST00000462429 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 ZBTB21Q9ULJ3 1066 aa5.54□□□□□ -1.52
VPS41-210ENST00000462429 LUC7L2Q9Y383 392 aaKnown RBP5.54□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA12O60330 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 SEC24DO94855 1032 aaPredicted RBP5.53□□□□□ -1.52
VPS41-210ENST00000462429 CFPP27918 469 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 CSF2RBP32927 897 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 MRE11P49959 708 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCOLCEQ15113 449 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 ZNF827Q17R98 1081 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 TMEM240Q5SV17 173 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 BORAQ6PGQ7 559 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS41-210ENST00000462429 TSPEARQ8WU66 669 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 JADE3Q92613 823 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 FATE1Q969F0 183 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 NKD2Q969F2 451 aaPredicted RBP5.53□□□□□ -1.52
VPS41-210ENST00000462429 ACE2Q9BYF1 805 aaPredicted RBP5.53□□□□□ -1.52
VPS41-210ENST00000462429 FAM184BQ9ULE4 1060 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA9Q9Y5G4 932 aaKnown RBP5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA8Q9Y5G5 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA6Q9Y5G7 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA3Q9Y5H0 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 PCDHGA2Q9Y5H1 932 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 EID1Q9Y6B2 187 aa5.53□□□□□ -1.52
VPS41-210ENST00000462429 A0A0A6YYK5 440 aaPredicted RBP5.52□□□□□ -1.53
VPS41-210ENST00000462429 AKAP10O43572 662 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 CT47B1P0C2W7 299 aaPredicted RBP5.52□□□□□ -1.53
VPS41-210ENST00000462429 ZNF888P0CJ79 500 aaPredicted RBP5.52□□□□□ -1.53
VPS41-210ENST00000462429 RAB27AP51159 221 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 RRADP55042 308 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 MGAT5Q09328 741 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 LARP4Q71RC2 724 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS41-210ENST00000462429 GPR155Q7Z3F1 870 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
VPS41-210ENST00000462429 PPP1R14CQ8TAE6 165 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms