RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 CAPSQ13938 189 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 MCM6Q14566 821 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 ARSHQ5FYA8 562 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 FAM43BQ6ZT52 329 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-204ENST00000461768 OTOP2Q7RTS6 562 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 FAM228AQ86W67 206 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 GPBP1Q86WP2 473 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 DAW1Q8N136 415 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 PDILTQ8N807 584 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 BSNDQ8WZ55 320 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 ZNF668Q96K58 619 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-204ENST00000461768 NLRP4Q96MN2 994 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 SCLT1Q96NL6 688 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 FDXACB1Q9BRP7 624 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-204ENST00000461768 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 GCOM2Q9BZD3 368 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-204ENST00000461768 ERVK-5Q9HDB9 667 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 PADI3Q9ULW8 664 aa9.36□□□□□ -0.91
SRRM1-204ENST00000461768 NPHP3-ACAD11A0A0J9YXS1 232 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 ABHD14A-ACY1A0A1B0GW23 586 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 GPR182O15218 404 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 EFCAB14O75071 495 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 HIP1RO75146 1068 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 PFKFB1P16118 471 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 PHKA2P46019 1235 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 PTENP60484 403 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 TFDP1Q14186 410 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 CDCA2Q69YH5 1023 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 MICAL3Q7RTP6 2002 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 SRGAP1Q7Z6B7 1085 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 IQUBQ8NA54 791 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 DRC1Q96MC2 740 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 FTHL17Q9BXU8 183 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 MTIF3Q9H2K0 278 aaKnown RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 TMX1Q9H3N1 280 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 CUEDC2Q9H467 287 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 MINDY3Q9H8M7 445 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 POLD4Q9HCU8 107 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-204ENST00000461768 KCNH3Q9ULD8 1083 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 ST3GAL5Q9UNP4 418 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 HPSEQ9Y251 543 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 LAMA3Q16787 3333 aa9.35□□□□□ -0.91
SRRM1-204ENST00000461768 A0A1B0GVL5 298 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 MYMKA6NI61 221 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 POLR2DO15514 142 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 CSDE1O75534 798 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 SFPQP23246 707 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 NAMPTP43490 491 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 ZNF131P52739 623 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 WDR5P61964 334 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 MBTD1Q05BQ5 628 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 GIT2Q14161 759 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 IKBKEQ14164 716 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 PPP2R5AQ15172 486 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 PCBP1Q15365 356 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 SV2BQ7L1I2 683 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 FSIP1Q8NA03 581 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 TMEM87AQ8NBN3 555 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 LINC01599Q8WXQ3 324 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 MRPS27Q92552 414 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 DHX58Q96C10 678 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 IFT74Q96LB3 600 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 REEP2Q9BRK0 252 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 PYM1Q9BRP8 204 aaKnown RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 INO80BQ9C086 356 aaPredicted RBP9.34□□□□□ -0.91
SRRM1-204ENST00000461768 TNMDQ9H2S6 317 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 C17orf75Q9HAS0 396 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
SRRM1-204ENST00000461768 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-204ENST00000461768 LRRIQ4A6NIV6 560 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 ZBBXA8MT70 800 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 ENPP3O14638 875 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 ACTN4O43707 911 aaKnown RBP9.33□□□□□ -0.92
SRRM1-204ENST00000461768 MGEA5O60502 916 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
SRRM1-204ENST00000461768 PLS3P13797 630 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 FGFR4P22455 802 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 NPTX2P47972 431 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 NDUFA8P51970 172 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 DMP1Q13316 513 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-204ENST00000461768 DSC3Q14574 896 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
SRRM1-204ENST00000461768 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
SRRM1-204ENST00000461768 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms