RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 STRIP1Q5VSL9 837 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 WDR59Q6PJI9 974 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 SLC7A3Q8WY07 619 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 GLG1Q92896 1179 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ACSL3O95573 720 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 SCFD1Q8WVM8 642 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 POLR3CQ9BUI4 534 aaPredicted RBP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF341Q9BYN7 854 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 WDR64B1ANS9 1081 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 TMEM253P0C7T8 217 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 CCND2P30279 289 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 TRIP13Q15645 432 aaPredicted RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 ZKSCAN8Q15776 578 aaPredicted RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 MSL3Q8N5Y2 521 aaKnown RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 STMN2Q93045 179 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 MTMR8Q96EF0 704 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 PRR12Q9ULL5 1215 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 POC1B-GALNT4F8VUJ3 575 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 LSP1P33241 339 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 KRT39Q6A163 491 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 PPP1R21Q6ZMI0 780 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 PPFIBP2Q8ND30 876 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 CCHCR1Q8TD31 782 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 NRBP2Q9NSY0 501 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 MYO3BQ8WXR4 1341 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 TNNC2P02585 160 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 CCDC137Q6PK04 289 aaKnown RBP12.96□□□□□ -0.33
CPNE6-202ENST00000460657 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 TCP11Q8WWU5 503 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.33
CPNE6-202ENST00000460657 UBE4BO95155 1302 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 TMEM191BP0C7N4 346 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 PON1P27169 355 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 CORO7P57737 925 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 PHLDB2Q86SQ0 1253 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 TPCN2Q8NHX9 752 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 LRRC8CQ8TDW0 803 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 MTMR9Q96QG7 549 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.34
CPNE6-202ENST00000460657 PSAPP07602 524 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 POLD1P28340 1107 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 SNX16P57768 344 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 KRT76Q01546 638 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 EVX2Q03828 476 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 KIAA1755Q5JYT7 1200 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ANKRD20A3Q5VUR7 823 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 MIS18BP1Q6P0N0 1132 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CCDC62Q6P9F0 684 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ZNF473Q8WTR7 871 aaKnown RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CFAP57Q96MR6 1250 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 PJA2O43164 708 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 RTN2O75298 545 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ENTPD3O75355 529 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 TMOD1P28289 359 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 HIBCHQ6NVY1 386 aaPredicted RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 CAVIN3Q969G5 261 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 PACSIN1Q9BY11 444 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ABCC6O95255 1503 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 RNF225M0QZC1 329 aaPredicted RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 MSH4O15457 936 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 PCK1P35558 622 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 AMPD2Q01433 879 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 BYSLQ13895 437 aaKnown RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 GIT2Q14161 759 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 DDX42Q86XP3 938 aaKnown RBP eCLIP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 IRF2BP1Q8IU81 584 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 MCPH1Q8NEM0 835 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 ARHGEF2Q92974 986 aaKnown RBP12.95□□□□□ -0.34
CPNE6-202ENST00000460657 RMDN3Q96TC7 470 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 MTRQ99707 1265 aa12.95□□□□□ -0.34
CPNE6-202ENST00000460657 TRIM51Q9BSJ1 452 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms