RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ATP2C1P98194 919 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 NCBP1Q09161 790 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 DSC3Q14574 896 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 ZRSR1Q15695 479 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 EPC2Q52LR7 807 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 SPOUT1Q5T280 376 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 SRGAP1Q7Z6B7 1085 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 TMEM192Q8IY95 271 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 IGSF22Q8N9C0 903 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 RNF169Q8NCN4 708 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 CHST12Q9NRB3 414 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 RWDD3Q9Y3V2 267 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 VWA3AA6NCI4 1184 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 BMP15O95972 392 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 CTNNB1P35222 781 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 GRB10Q13322 594 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 CMTR2Q8IYT2 770 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 ABI1Q8IZP0 508 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 MCPH1Q8NEM0 835 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 GDPD5Q8WTR4 605 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 ZNF689Q96CS4 500 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 XPNPEP1Q9NQW7 623 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 DDX19AQ9NUU7 478 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 TMEM161AQ9NX61 479 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 DNM3Q9UQ16 869 aa20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 PIN4Q9Y237 131 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-215ENST00000456545 TBKBP1A7MCY6 615 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 HOXA2O43364 376 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 ERLIN2O94905 339 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 FAM189BP81408 668 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 GPM6BQ13491 265 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 FAM102BQ5T8I3 360 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 PADI6Q6TGC4 694 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 CDK5RAP3Q96JB5 506 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 POLR3FQ9H1D9 316 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 IFT122Q9HBG6 1241 aa20.08■□□□□ 0.81
PDLIM2-215ENST00000456545 ARID2Q68CP9 1835 aa20.08■□□□□ 0.8
PDLIM2-215ENST00000456545 PP2D1A8MPX8 630 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 SKIP12755 728 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 CDC25AP30304 524 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 ARL2P36404 184 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 GATMP50440 423 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 SKIV2LQ15477 1246 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 IL17AQ16552 155 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 ECHDC2Q86YB7 292 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 MTCH2Q9Y6C9 303 aa20.07■□□□□ 0.8
PDLIM2-215ENST00000456545 INO80B-WBP1J3KQ70 363 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 STX6O43752 255 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 RB1P06400 928 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 BMPR1AP36894 532 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 SF3A1Q15459 793 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 ECM1Q16610 540 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 PTPROQ16827 1216 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 CRIPAKQ8N1N5 446 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 BHMT2Q9H2M3 363 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 LMCD1Q9NZU5 365 aa20.06■□□□□ 0.8
PDLIM2-215ENST00000456545 A0A0U1RQF3 1178 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 LRRIQ4A6NIV6 560 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 EOMESO95936 686 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 FGFR1P11362 822 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 CYP11B2P19099 503 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 POU3F3P20264 500 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 PTENP60484 403 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 C11orf84Q9BUA3 381 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 ZSCAN16Q9H4T2 348 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 GPRC5CQ9NQ84 441 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 AAASQ9NRG9 546 aa20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 MRPL42Q9Y6G3 142 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-215ENST00000456545 E9PMD0 336 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 H3BNC9 293 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 GLRA2P23416 452 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 UBA7P41226 1012 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 POU5F1BQ06416 359 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 CAPSQ13938 189 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 PCBP1Q15365 356 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 ZBTB8OSQ8IWT0 167 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 SPRYD3Q8NCJ5 442 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 RASSF8Q8NHQ8 419 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 IFT74Q96LB3 600 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 TMEM117Q9H0C3 514 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 NT5C3AQ9H0P0 336 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 MINDY3Q9H8M7 445 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 RC3H2Q9HBD1 1191 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 AGPAT5Q9NUQ2 364 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 PCDHB12Q9Y5F1 795 aa20.04■□□□□ 0.8
PDLIM2-215ENST00000456545 LPXNO60711 386 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 EYA4O95677 639 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 SSBP05455 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 RAB27AP51159 221 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 CEBPZQ03701 1054 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 PPP2R5AQ15172 486 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 TMEM132AQ24JP5 1023 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 CABP7Q86V35 215 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 CLP1Q92989 425 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 PGBD4Q96DM1 585 aa20.03■□□□□ 0.8
PDLIM2-215ENST00000456545 CALML4Q96GE6 196 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms