RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 SEC24BO95487 1268 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 GCFC2P16383 781 aaKnown RBP24.4■■□□□ 1.5
SEC22C-213ENST00000456222 LAG3P18627 525 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 QARSP47897 775 aaKnown RBP24.4■■□□□ 1.5
SEC22C-213ENST00000456222 UBE3AQ05086 875 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 SMAD4Q13485 552 aaKnown RBP24.4■■□□□ 1.5
SEC22C-213ENST00000456222 RHPN2Q8IUC4 686 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 GTF3C6Q969F1 213 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 GCOM2Q9BZD3 368 aaPredicted RBP24.4■■□□□ 1.5
SEC22C-213ENST00000456222 CYP26B1Q9NR63 512 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 PRKAG3Q9UGI9 489 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 FAM50BQ9Y247 325 aa24.4■■□□□ 1.5
SEC22C-213ENST00000456222 WNT7AO00755 349 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 FSCN2O14926 492 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 JAK2O60674 1132 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 GPR37L1O60883 481 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 SPIRE1Q08AE8 756 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 ST3GAL1Q11201 340 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 KCNT2Q6UVM3 1135 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 NSUN7Q8NE18 718 aaKnown RBP24.39■■□□□ 1.49
SEC22C-213ENST00000456222 HELQQ8TDG4 1101 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 MICAL1Q8TDZ2 1067 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 TLE6Q9H808 572 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 RGL1Q9NZL6 768 aa24.39■■□□□ 1.49
SEC22C-213ENST00000456222 ZBTB39O15060 712 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 EYA4O95677 639 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 XBP1P17861 261 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 FOSBP53539 338 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 ANKRD1Q15327 319 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 LONRF3Q496Y0 759 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 LRRC43Q8N309 656 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 PPP2R3CQ969Q6 453 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 NLRP4Q96MN2 994 aa24.38■■□□□ 1.49
SEC22C-213ENST00000456222 BMP2KQ9NSY1 1161 aaPredicted RBP24.38■■□□□ 1.49
SEC22C-213ENST00000456222 MEIS3P2A8K0S8 358 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 HOXA2O43364 376 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 DNM2P50570 870 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 PLCB3Q01970 1234 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 PLPP4Q5VZY2 271 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 NCAPH2Q6IBW4 605 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 ABI1Q8IZP0 508 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 SMRP1Q8NCR6 262 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 MRPS27Q92552 414 aaKnown RBP24.37■■□□□ 1.49
SEC22C-213ENST00000456222 LPPQ93052 612 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 LXNQ9BS40 222 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 IFT122Q9HBG6 1241 aa24.37■■□□□ 1.49
SEC22C-213ENST00000456222 TBX3O15119 743 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 P4HBP07237 508 aaKnown RBP24.36■■□□□ 1.49
SEC22C-213ENST00000456222 KRT2P35908 639 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 PHKA2P46019 1235 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 EPHA7Q15375 998 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 DUSP6Q16828 381 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 CSPP1Q1MSJ5 1256 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 ZNF410Q86VK4 478 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 TMEM143Q96AN5 459 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 DYDC2Q96IM9 177 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 CEP170P1Q96L14 293 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 ZNF558Q96NG5 402 aa24.36■■□□□ 1.49
SEC22C-213ENST00000456222 DHX33Q9H6R0 707 aaKnown RBP24.36■■□□□ 1.49
SEC22C-213ENST00000456222 HIDE1A8MVS5 230 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 EOMESO95936 686 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 NEK4P51957 841 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 CYP4A11Q02928 519 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 COASYQ13057 564 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 CTTNQ14247 550 aaKnown RBP24.35■■□□□ 1.49
SEC22C-213ENST00000456222 MINDY3Q9H8M7 445 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 DACT1Q9NYF0 836 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 PIN4Q9Y237 131 aaKnown RBP24.35■■□□□ 1.49
SEC22C-213ENST00000456222 LZTS1Q9Y250 596 aa24.35■■□□□ 1.49
SEC22C-213ENST00000456222 BTBD18B2RXH4 712 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 SFPQP23246 707 aaKnown RBP eCLIP24.34■■□□□ 1.49
SEC22C-213ENST00000456222 CDC42EP1Q00587 391 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 KCNC3Q14003 757 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 TWF2Q6IBS0 349 aaKnown RBP24.34■■□□□ 1.49
SEC22C-213ENST00000456222 C4orf19Q8IY42 314 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 SLC39A11Q8N1S5 342 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 PRPF31Q8WWY3 499 aaKnown RBP24.34■■□□□ 1.49
SEC22C-213ENST00000456222 WASF1Q92558 559 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 TCF25Q9BQ70 676 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 TRAIPQ9BWF2 469 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 CHST12Q9NRB3 414 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 SPG21Q9NZD8 308 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 USP15Q9Y4E8 981 aaPredicted RBP24.34■■□□□ 1.49
SEC22C-213ENST00000456222 COL4A3BPQ9Y5P4 624 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 MUC6Q6W4X9 2439 aa24.34■■□□□ 1.49
SEC22C-213ENST00000456222 NT5C1B-RDH14C9J2C7 533 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 DCXO43602 365 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 MARCH6O60337 910 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 YWHABP31946 246 aaKnown RBP24.33■■□□□ 1.49
SEC22C-213ENST00000456222 POLGP54098 1239 aaPredicted RBP24.33■■□□□ 1.49
SEC22C-213ENST00000456222 ERICH6BQ5W0A0 696 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 CATSPER4Q7RTX7 472 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 TMEM173Q86WV6 379 aaPredicted RBP24.33■■□□□ 1.49
SEC22C-213ENST00000456222 SLC7A3Q8WY07 619 aa24.33■■□□□ 1.49
SEC22C-213ENST00000456222 TECTAO75443 2155 aa24.33■■□□□ 1.48
SEC22C-213ENST00000456222 B4GALT3O60512 393 aa24.32■■□□□ 1.48
SEC22C-213ENST00000456222 SRGAP2CP0DJJ0 459 aa24.32■■□□□ 1.48
SEC22C-213ENST00000456222 ALADP13716 330 aa24.32■■□□□ 1.48
SEC22C-213ENST00000456222 BCAR1P56945 870 aa24.32■■□□□ 1.48
SEC22C-213ENST00000456222 NAP1L4Q99733 375 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms