RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 IGSF22Q8N9C0 903 aa22.74■■□□□ 1.23
TNRC18-208ENST00000455076 ATXN2LQ8WWM7 1075 aaKnown RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 PRPF31Q8WWY3 499 aaKnown RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 P2RX5Q93086 422 aa22.74■■□□□ 1.23
TNRC18-208ENST00000455076 MRPL38Q96DV4 380 aaKnown RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 C11orf84Q9BUA3 381 aaPredicted RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 ATP6V0A4Q9HBG4 840 aa22.74■■□□□ 1.23
TNRC18-208ENST00000455076 DACT1Q9NYF0 836 aa22.74■■□□□ 1.23
TNRC18-208ENST00000455076 DBR1Q9UK59 544 aaKnown RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 MRPL42Q9Y6G3 142 aaKnown RBP22.74■■□□□ 1.23
TNRC18-208ENST00000455076 BRWD1Q9NSI6 2320 aa22.74■■□□□ 1.23
TNRC18-208ENST00000455076 TTC28Q96AY4 2481 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 ATG2AQ2TAZ0 1938 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 A0A0U1RQF3 1178 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 HOXA2O43364 376 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 CTNNB1P35222 781 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 LAMTOR4Q0VGL1 99 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 GPM6BQ13491 265 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 PDIA5Q14554 519 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 CCDC85BQ15834 202 aaPredicted RBP22.73■■□□□ 1.23
TNRC18-208ENST00000455076 PTPROQ16827 1216 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 NAALADL2Q58DX5 795 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 ZNF598Q86UK7 904 aaKnown RBP22.73■■□□□ 1.23
TNRC18-208ENST00000455076 IFNLR1Q8IU57 520 aaPredicted RBP22.73■■□□□ 1.23
TNRC18-208ENST00000455076 KSR1Q8IVT5 923 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 PPM1EQ8WY54 764 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 RSPH1Q8WYR4 309 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 TMEM143Q96AN5 459 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 NLRP4Q96MN2 994 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 LMAN2LQ9H0V9 348 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 PRDM6Q9NQX0 595 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 STK24Q9Y6E0 443 aa22.73■■□□□ 1.23
TNRC18-208ENST00000455076 H3BQV1 296 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 FGFR4P22455 802 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 PTGDRQ13258 359 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 MXD4Q14582 209 aaPredicted RBP22.72■■□□□ 1.23
TNRC18-208ENST00000455076 PCBP1Q15365 356 aaKnown RBP eCLIP22.72■■□□□ 1.233e-7■■■■■ 45.6
TNRC18-208ENST00000455076 ECHDC2Q86YB7 292 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 MICALL1Q8N3F8 863 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 NACC1Q96RE7 527 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 RNF19AQ9NV58 838 aa22.72■■□□□ 1.23
TNRC18-208ENST00000455076 MUC3AQ02505 3323 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 CSDE1O75534 798 aaKnown RBP22.71■■□□□ 1.23
TNRC18-208ENST00000455076 EOMESO95936 686 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 ARL2P36404 184 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 GATMP50440 423 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 TIGD5Q53EQ6 642 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 FAM102BQ5T8I3 360 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 PIGOQ8TEQ8 1089 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 NFKBIZQ9BYH8 718 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 RAB34Q9BZG1 259 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 TMEM117Q9H0C3 514 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 AGPAT5Q9NUQ2 364 aa22.71■■□□□ 1.23
TNRC18-208ENST00000455076 ATF7P17544 494 aaPredicted RBP22.7■■□□□ 1.22
TNRC18-208ENST00000455076 MCTP1Q6DN14 999 aa22.7■■□□□ 1.22
TNRC18-208ENST00000455076 CCDC43Q96MW1 224 aaKnown RBP22.7■■□□□ 1.22
TNRC18-208ENST00000455076 BMP2KQ9NSY1 1161 aaPredicted RBP22.7■■□□□ 1.22
TNRC18-208ENST00000455076 COG5Q9UP83 839 aa22.7■■□□□ 1.22
TNRC18-208ENST00000455076 PHKA2P46019 1235 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 RAB27AP51159 221 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 PTENP60484 403 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 ATP2C1P98194 919 aaPredicted RBP22.69■■□□□ 1.22
TNRC18-208ENST00000455076 PAN2Q504Q3 1202 aaKnown RBP22.69■■□□□ 1.22
TNRC18-208ENST00000455076 LARP1BQ659C4 914 aaKnown RBP22.69■■□□□ 1.22
TNRC18-208ENST00000455076 POTEGQ6S5H5 508 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 CATSPER4Q7RTX7 472 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 RNF149Q8NC42 400 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 MCPH1Q8NEM0 835 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 INTS4Q96HW7 963 aaKnown RBP22.69■■□□□ 1.22
TNRC18-208ENST00000455076 MINDY3Q9H8M7 445 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 LRWD1Q9UFC0 647 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 PIN4Q9Y237 131 aaKnown RBP22.69■■□□□ 1.22
TNRC18-208ENST00000455076 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
TNRC18-208ENST00000455076 TBKBP1A7MCY6 615 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 ZNF623O75123 536 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 FGFR1P11362 822 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 SKIP12755 728 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 TFDP1Q14186 410 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 COL19A1Q14993 1142 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 TJAP1Q5JTD0 557 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 CASD1Q96PB1 797 aa22.68■■□□□ 1.22
TNRC18-208ENST00000455076 MYO7AQ13402 2215 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 SRGAP2CP0DJJ0 459 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 GLRA2P23416 452 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 CAPSQ13938 189 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 IL17AQ16552 155 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 CSPP1Q1MSJ5 1256 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 CLLU1OSQ5K130 101 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 BRAPQ7Z569 592 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 LRRC43Q8N309 656 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 ASAP3Q8TDY4 903 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 ASB2Q96Q27 587 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 CWH43Q9H720 699 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 PLAGL2Q9UPG8 496 aa22.67■■□□□ 1.22
TNRC18-208ENST00000455076 GRM6O15303 877 aa22.66■■□□□ 1.22
TNRC18-208ENST00000455076 USO1O60763 962 aaKnown RBP22.66■■□□□ 1.22
TNRC18-208ENST00000455076 PDCP20941 246 aa22.66■■□□□ 1.22
TNRC18-208ENST00000455076 HOXA11P31270 313 aaPredicted RBP22.66■■□□□ 1.22
TNRC18-208ENST00000455076 MRPS5P82675 430 aaKnown RBP22.66■■□□□ 1.22
TNRC18-208ENST00000455076 ECM1Q16610 540 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms