RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 EOMESO95936 686 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 MRE11P49959 708 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 UGCGQ16739 394 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 Q4G0T1 1027 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 ANKRD54Q6NXT1 300 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 LRRC55Q6ZSA7 311 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 SUGP1Q8IWZ8 645 aaKnown RBP12.27□□□□□ -0.45
USP1-204ENST00000452143 TRIM22Q8IYM9 498 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 CHST12Q9NRB3 414 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 SPG21Q9NZD8 308 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 CHMP2AO43633 222 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 PSMD10O75832 226 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 SFPQP23246 707 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP1-204ENST00000452143 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 TECP42680 631 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 NLRP5P59047 1200 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 SIGLEC14Q08ET2 396 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 SMC1AQ14683 1233 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 TARBP2Q15633 366 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 XKR3Q5GH77 459 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 MOXD1Q6UVY6 613 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 TMC7Q7Z402 723 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 ZNF598Q86UK7 904 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 SLC39A11Q8N1S5 342 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 NIFKQ9BYG3 293 aaKnown RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
USP1-204ENST00000452143 S1PR5Q9H228 398 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 UNC45AQ9H3U1 944 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 PCDHA4Q9UN74 947 aa12.26□□□□□ -0.45
USP1-204ENST00000452143 DENND4AQ7Z401 1863 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 CYP3A7-CYP3A51PA0A087WV96 503 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 IGKV6-21A0A0C4DH24 114 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 HIDE1A8MVS5 230 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 EDIL3O43854 480 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 SKIP12755 728 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 CYP3A7P24462 503 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 PBX3P40426 434 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 ALDH7A1P49419 539 aaKnown RBP12.25□□□□□ -0.45
USP1-204ENST00000452143 DNM2P50570 870 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 PTPN5P54829 565 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
USP1-204ENST00000452143 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 GALNT17Q6IS24 598 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 SYCE2Q6PIF2 218 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 B3GNT9Q6UX72 402 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 MIER3Q7Z3K6 550 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 DAGLBQ8NCG7 672 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 RNF169Q8NCN4 708 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 HELQQ8TDG4 1101 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 CASP10Q92851 521 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 NECTIN4Q96NY8 510 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
USP1-204ENST00000452143 NCOA5Q9HCD5 579 aaKnown RBP12.25□□□□□ -0.45
USP1-204ENST00000452143 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
USP1-204ENST00000452143 HCFC2Q9Y5Z7 792 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 ARID2Q68CP9 1835 aa12.25□□□□□ -0.45
USP1-204ENST00000452143 MYO15AQ9UKN7 3530 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 C2orf71A6NGG8 1288 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 M0R2N6 131 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 DEXIO95424 95 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 PHKA2P46019 1235 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 CCT2P78371 535 aaKnown RBP12.24□□□□□ -0.45
USP1-204ENST00000452143 ITIH3Q06033 890 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 CES5AQ6NT32 575 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 LLGL2Q6P1M3 1020 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 MRPL43Q8N983 215 aaKnown RBP12.24□□□□□ -0.45
USP1-204ENST00000452143 TMEM169Q96HH4 297 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 MBOAT7Q96N66 472 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 CEP89Q96ST8 783 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 JPH2Q9BR39 696 aaPredicted RBP12.24□□□□□ -0.45
USP1-204ENST00000452143 NR2E1Q9Y466 385 aa12.24□□□□□ -0.45
USP1-204ENST00000452143 CPLX1O14810 134 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 TDP2O95551 362 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 RAB27AP51159 221 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 POLGP54098 1239 aaPredicted RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 BCAR1P56945 870 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 DRP2Q13474 957 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 TOB2Q14106 344 aaPredicted RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 GIT2Q14161 759 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 MTERF2Q49AM1 385 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 CPLX2Q6PUV4 134 aaKnown RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 PRSS33Q8NF86 280 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 ASIC4Q96FT7 647 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 ZNF668Q96K58 619 aaPredicted RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms