RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 FAM133AQ8N9E0 248 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GDAP1Q8TB36 358 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MGARPQ8TDB4 240 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 IRGQQ8WZA9 623 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PTPRN2Q92932 1015 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SNF8Q96H20 258 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 FAXDC2Q96IV6 333 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SERPINB12Q96P63 405 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CDC5LQ99459 802 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ZBED2Q9BTP6 218 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NHEJ1Q9H9Q4 299 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 PICK1Q9NRD5 415 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MPP6Q9NZW5 540 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GTF3C4Q9UKN8 822 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PCDHA7Q9UN72 937 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RABL2BQ9UNT1 228 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ITM2BQ9Y287 266 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZC3H13Q5T200 1668 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 NWD1Q149M9 1564 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 DIP2CQ9Y2E4 1556 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 UMODL1Q5DID0 1318 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TRIM43BA6NCK2 446 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TOM1L1O75674 476 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 FAM58BPP0C7Q3 252 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CHN1P15882 459 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PLCG1P19174 1290 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TNFAIP3P21580 790 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 EIF4BP23588 611 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 PEX5P50542 639 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CHN2P52757 468 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 POLGP54098 1239 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 RAB25P57735 213 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ASIC1P78348 528 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PKP1Q13835 747 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SF3B3Q15393 1217 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP44Q17R89 818 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KLHL12Q53G59 568 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ARMCX4Q5H9R4 360 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TMEM67Q5HYA8 995 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NIPAL1Q6NVV3 410 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 C1orf228Q6PIY5 440 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 EPM2AIP1Q7L775 607 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 NET1Q7Z628 596 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 NME9Q86XW9 330 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CRLF3Q8IUI8 442 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 REXO1L1PQ8IX06 675 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TTC5Q8N0Z6 440 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 AFG1LQ8WV93 481 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LPIN2Q92539 896 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 APPBP2Q92624 585 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CDKL2Q92772 493 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NSL1Q96IY1 281 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NEUROD6Q96NK8 337 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZIM3Q96PE6 472 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TMEM237Q96Q45 408 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SLC39A3Q9BRY0 314 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TRIM45Q9H8W5 580 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.35□□□□□ -2.03
USP53-202ENST00000450251 PRM3Q9NNZ6 103 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 METTL5Q9NRN9 209 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 TAB2Q9NYJ8 693 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RABL2AQ9UBK7 228 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 DNAJB4Q9UDY4 337 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 DAPK2Q9UIK4 370 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CNOT7Q9UIV1 285 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 GNPTGQ9UJJ9 305 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PCDHGC5Q9Y5F6 944 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KIF1BO60333 1816 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NCKAP5LQ9HCH0 1330 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 A0A1B0GTH6 734 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 HNRNPCL2B2RXH8 293 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 AP3B1O00203 1094 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GABBR2O75899 941 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PRLP01236 227 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 AFMP43652 599 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TRAPPC10P48553 1259 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ARFIP2P53365 341 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GJA9P57773 515 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CCT2P78371 535 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 FKBP4Q02790 459 aaKnown RBP eCLIP2.35□□□□□ -2.03
USP53-202ENST00000450251 CYP4A11Q02928 519 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SULT2A1Q06520 285 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MPP3Q13368 585 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PNOCQ13519 176 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LPIN1Q14693 890 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SNX17Q15036 470 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ANGPT1Q15389 498 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CNGA2Q16280 664 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 DPCR1Q3MIW9 517 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CYP4A22Q5TCH4 519 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 THEMIS2Q5TEJ8 643 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RESP18Q5W5W9 173 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TTC27Q6P3X3 843 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TTC30BQ8N4P2 665 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CRACR2BQ8N4Y2 399 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 DTX3LQ8TDB6 740 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CDCA5Q96FF9 252 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 FAM161BQ96MY7 647 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZKSCAN3Q9BRR0 538 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 AZI2Q9H6S1 392 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms