RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ITGA7Q13683 1181 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 HIC1Q14526 733 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 RHPN2Q8IUC4 686 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 RNF214Q8ND24 703 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 SCFD1Q8WVM8 642 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 DHTKD1Q96HY7 919 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 MAP7D2Q96T17 732 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 BPIFA3Q9BQP9 254 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 PHF24Q9UPV7 400 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 CTNND2Q9UQB3 1225 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 AKT3Q9Y243 479 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 H0YCG3 227 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 EIF3DO15371 548 aaKnown RBP eCLIP21.53■■□□□ 1.04
SGCE-207ENST00000447873 ASAP2O43150 1006 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 TREHO43280 583 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 SGPL1O95470 568 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 TFRCP02786 760 aaKnown RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 GJB1P08034 283 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 CYP2C9P11712 490 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 NAMPTP43490 491 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 NCKAP1LP55160 1127 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ZNF200P98182 395 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 LAMTOR4Q0VGL1 99 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 PAK1Q13153 545 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ALCAMQ13740 583 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ZC2HC1CQ53FD0 456 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 EPM2AIP1Q7L775 607 aaPredicted RBP21.53■■□□□ 1.04
SGCE-207ENST00000447873 HAUS6Q7Z4H7 955 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 SESTD1Q86VW0 696 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 NELFBQ8WX92 580 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 KIFC3Q9BVG8 833 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 ST6GALNAC4Q9H4F1 302 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 CBX8Q9HC52 389 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 STARD7Q9NQZ5 370 aa21.53■■□□□ 1.04
SGCE-207ENST00000447873 GRIN2DO15399 1336 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 SMIM35A0A1B0GVV1 85 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 LRRIQ4A6NIV6 560 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 PRPF6O94906 941 aaKnown RBP21.52■■□□□ 1.04
SGCE-207ENST00000447873 TFDP1Q14186 410 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 GSE1Q14687 1217 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 KSR1Q8IVT5 923 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 DEPTORQ8TB45 409 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 U2AF1L4Q8WU68 220 aaKnown RBP21.52■■□□□ 1.04
SGCE-207ENST00000447873 FAM49AQ9H0Q0 323 aaPredicted RBP21.52■■□□□ 1.04
SGCE-207ENST00000447873 RBSNQ9H1K0 784 aa21.52■■□□□ 1.04
SGCE-207ENST00000447873 BRCA2P51587 3418 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 BECN2A8MW95 431 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 SRGAP2CP0DJJ0 459 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
SGCE-207ENST00000447873 CAPSQ13938 189 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 BMT2Q1RMZ1 405 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 GDF6Q6KF10 455 aaPredicted RBP21.51■■□□□ 1.03
SGCE-207ENST00000447873 NELFCDQ8IXH7 590 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 KIAA0319LQ8IZA0 1049 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 TMEM161BQ8NDZ6 487 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 ZNF507Q8TCN5 953 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 CRISPLD2Q9H0B8 497 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 RWDD2AQ9UIY3 292 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 UBE4BO95155 1302 aa21.51■■□□□ 1.03
SGCE-207ENST00000447873 DENND3A2RUS2 1198 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 PPP1R37O75864 691 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 STX17P56962 302 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 GTF2BQ00403 316 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 AOPEPQ8N6M6 819 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 RNF149Q8NC42 400 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 P2RX5Q93086 422 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 NLRP4Q96MN2 994 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 STRA6Q9BX79 667 aa21.5■■□□□ 1.03
SGCE-207ENST00000447873 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
SGCE-207ENST00000447873 BICDL2A1A5D9 508 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 VTNP04004 478 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 SCP2P22307 547 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 CCNE1P24864 410 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 ABCD1P33897 745 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 IQCB1Q15051 598 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 KNOP1Q1ED39 458 aaKnown RBP21.49■■□□□ 1.03
SGCE-207ENST00000447873 TAF2Q6P1X5 1199 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 RUFY4Q6ZNE9 571 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 LUZP1Q86V48 1076 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 MCOLN1Q9GZU1 580 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 ARHGAP28Q9P2N2 729 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 DNAH12Q6ZR08 3092 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 ADGRA3Q8IWK6 1321 aa21.49■■□□□ 1.03
SGCE-207ENST00000447873 GOLGA6L3A6NEY3 463 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 SMTNL1A8MU46 457 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 CDC42EP1Q00587 391 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 MYL5Q02045 173 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 KCNA1Q09470 495 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 CENPPQ6IPU0 288 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 ZBTB8OSQ8IWT0 167 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 DHX40Q8IX18 779 aaKnown RBP21.48■■□□□ 1.03
SGCE-207ENST00000447873 ENOX1Q8TC92 643 aaKnown RBP21.48■■□□□ 1.03
SGCE-207ENST00000447873 DNAJB3Q8WWF6 145 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 HVCN1Q96D96 273 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 SEMA6BQ9H3T3 888 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 TBX20Q9UMR3 447 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 TRIM49BA6NDI0 452 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 IKBKBO14920 756 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 HOXD13P35453 343 aa21.48■■□□□ 1.03
SGCE-207ENST00000447873 GJA8P48165 433 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms