RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ZNF598Q86UK7 904 aaKnown RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 RHPN2Q8IUC4 686 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 KSR1Q8IVT5 923 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 ABI1Q8IZP0 508 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 MICAL1Q8TDZ2 1067 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 HAS1Q92839 578 aa20.42■□□□□ 0.86
COL9A1-205ENST00000447041 GCOM2Q9BZD3 368 aaPredicted RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 SUCLA2Q9P2R7 463 aaPredicted RBP20.42■□□□□ 0.86
COL9A1-205ENST00000447041 A0A0U1RQF3 1178 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 FSCN2O14926 492 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 PER2O15055 1255 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 QARSP47897 775 aaKnown RBP20.41■□□□□ 0.86
COL9A1-205ENST00000447041 DNM2P50570 870 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 NPEPPSP55786 919 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 CSPP1Q1MSJ5 1256 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 ZNF579Q8NAF0 562 aaKnown RBP20.41■□□□□ 0.86
COL9A1-205ENST00000447041 HELQQ8TDG4 1101 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 NLRP4Q96MN2 994 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 TLE6Q9H808 572 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 CYP26B1Q9NR63 512 aa20.41■□□□□ 0.86
COL9A1-205ENST00000447041 KRT2P35908 639 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 PLPP4Q5VZY2 271 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 KCNT2Q6UVM3 1135 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 ZNF410Q86VK4 478 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 VN1R2Q8NFZ6 395 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 MRPS27Q92552 414 aaKnown RBP20.4■□□□□ 0.86
COL9A1-205ENST00000447041 WASF1Q92558 559 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 TNFRSF25Q93038 417 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 ZNF558Q96NG5 402 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 LXNQ9BS40 222 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 BMP2KQ9NSY1 1161 aaPredicted RBP20.4■□□□□ 0.86
COL9A1-205ENST00000447041 DACT1Q9NYF0 836 aa20.4■□□□□ 0.86
COL9A1-205ENST00000447041 TBX3O15119 743 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 EYA4O95677 639 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 P4HBP07237 508 aaKnown RBP20.39■□□□□ 0.85
COL9A1-205ENST00000447041 SFPQP23246 707 aaKnown RBP eCLIP20.39■□□□□ 0.85
COL9A1-205ENST00000447041 CDC42EP1Q00587 391 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 PLCB3Q01970 1234 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 COASYQ13057 564 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 NCAPH2Q6IBW4 605 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 SMRP1Q8NCR6 262 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 NSUN7Q8NE18 718 aaKnown RBP20.39■□□□□ 0.85
COL9A1-205ENST00000447041 CEP170P1Q96L14 293 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 NAP1L4Q99733 375 aaKnown RBP20.39■□□□□ 0.85
COL9A1-205ENST00000447041 PIN4Q9Y237 131 aaKnown RBP20.39■□□□□ 0.85
COL9A1-205ENST00000447041 LZTS1Q9Y250 596 aa20.39■□□□□ 0.85
COL9A1-205ENST00000447041 DCXO43602 365 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 MARCH6O60337 910 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 JAK2O60674 1132 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 EOMESO95936 686 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 ALADP13716 330 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 PHKA2P46019 1235 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 FOSBP53539 338 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 SPIRE1Q08AE8 756 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 EPHA7Q15375 998 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 DUSP6Q16828 381 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 LONRF3Q496Y0 759 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 TWF2Q6IBS0 349 aaKnown RBP20.38■□□□□ 0.85
COL9A1-205ENST00000447041 SLC7A3Q8WY07 619 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 LPPQ93052 612 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 DYDC2Q96IM9 177 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 TCF25Q9BQ70 676 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 JPH2Q9BR39 696 aaPredicted RBP20.38■□□□□ 0.85
COL9A1-205ENST00000447041 ENTPD7Q9NQZ7 604 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 CHST12Q9NRB3 414 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 RGL1Q9NZL6 768 aa20.38■□□□□ 0.85
COL9A1-205ENST00000447041 HIDE1A8MVS5 230 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 DKC1O60832 514 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL9A1-205ENST00000447041 PPM1AP35813 382 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 POLGP54098 1239 aaPredicted RBP20.37■□□□□ 0.85
COL9A1-205ENST00000447041 CYP4A11Q02928 519 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 CATSPER4Q7RTX7 472 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 TMEM143Q96AN5 459 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 POP1Q99575 1024 aaKnown RBP20.37■□□□□ 0.85
COL9A1-205ENST00000447041 INO80BQ9C086 356 aaPredicted RBP20.37■□□□□ 0.85
COL9A1-205ENST00000447041 DHX33Q9H6R0 707 aaKnown RBP20.37■□□□□ 0.85
COL9A1-205ENST00000447041 IFT122Q9HBG6 1241 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 BRMS1Q9HCU9 246 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 COL4A3BPQ9Y5P4 624 aa20.37■□□□□ 0.85
COL9A1-205ENST00000447041 MEIS3P2A8K0S8 358 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 WNT7AO00755 349 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 ZBTB39O15060 712 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 YWHABP31946 246 aaKnown RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 NEK4P51957 841 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 ST3GAL1Q11201 340 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 CTTNQ14247 550 aaKnown RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 ERICH6BQ5W0A0 696 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 PDE12Q6L8Q7 609 aaKnown RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 C4orf19Q8IY42 314 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 SLFN12Q8IYM2 578 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 SLC39A11Q8N1S5 342 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 CDCA3Q99618 268 aaPredicted RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 TRAIPQ9BWF2 469 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 MRPL9Q9BYD2 267 aaKnown RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 FAM105AQ9NUU6 356 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 SPG21Q9NZD8 308 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 PUF60Q9UHX1 559 aaKnown RBP20.36■□□□□ 0.85
COL9A1-205ENST00000447041 HCN4Q9Y3Q4 1203 aa20.36■□□□□ 0.85
COL9A1-205ENST00000447041 USP15Q9Y4E8 981 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms