RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GAS2O43903 313 aaKnown RBP16.5■□□□□ 0.23
HDAC4-204ENST00000446876 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDAC4-204ENST00000446876 SARSP49591 514 aaKnown RBP16.5■□□□□ 0.23
HDAC4-204ENST00000446876 KRT79Q5XKE5 535 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 PADI6Q6TGC4 694 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 CRIPAKQ8N1N5 446 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 RNF149Q8NC42 400 aa16.5■□□□□ 0.23
HDAC4-204ENST00000446876 ADGRA3Q8IWK6 1321 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 DGKIO75912 1065 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 IGFBP4P22692 258 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 SFPQP23246 707 aaKnown RBP eCLIP16.49■□□□□ 0.234e-6■■■■□ 23.6
HDAC4-204ENST00000446876 GLRA2P23416 452 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 ARL2P36404 184 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
HDAC4-204ENST00000446876 CAPSQ13938 189 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 PAN2Q504Q3 1202 aaKnown RBP16.49■□□□□ 0.23
HDAC4-204ENST00000446876 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
HDAC4-204ENST00000446876 KCNK18Q7Z418 384 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 GDPD5Q8WTR4 605 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 PNMA5Q96PV4 448 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
HDAC4-204ENST00000446876 GAS2L1Q99501 681 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-204ENST00000446876 PLIN2Q99541 437 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 POLD4Q9HCU8 107 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 C1orf112Q9NSG2 853 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 LRFN2Q9ULH4 789 aa16.49■□□□□ 0.23
HDAC4-204ENST00000446876 STAG3L1P0CL83 205 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-204ENST00000446876 MUTP22033 750 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 ERVK-21P61565 698 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 PTPAQ15257 358 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 FAM102BQ5T8I3 360 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 SLC24A5Q71RS6 500 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 CATSPER4Q7RTX7 472 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 ZNF689Q96CS4 500 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-204ENST00000446876 PIN4Q9Y237 131 aaKnown RBP16.48■□□□□ 0.23
HDAC4-204ENST00000446876 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 COL6A3P12111 3177 aa16.48■□□□□ 0.23
HDAC4-204ENST00000446876 ASAP2O43150 1006 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 BMP15O95972 392 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 FGFR1P11362 822 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-204ENST00000446876 PHKA2P46019 1235 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 GRB10Q13322 594 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 PKP1Q13835 747 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-204ENST00000446876 MXD4Q14582 209 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-204ENST00000446876 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 FIBCD1Q8N539 461 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 RNF169Q8NCN4 708 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-204ENST00000446876 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 USP28Q96RU2 1077 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 INO80BQ9C086 356 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-204ENST00000446876 HCSTQ9UBK5 93 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 ATG2AQ2TAZ0 1938 aa16.47■□□□□ 0.23
HDAC4-204ENST00000446876 LPXNO60711 386 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 EYA4O95677 639 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 LINC00271P0C7V0 271 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 CYP11B2P19099 503 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 PTENP60484 403 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 FAM189BP81408 668 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 TFDP1Q14186 410 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 CABP7Q86V35 215 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 ECHDC2Q86YB7 292 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 MICALL1Q8N3F8 863 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 PPM1EQ8WY54 764 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-204ENST00000446876 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
HDAC4-204ENST00000446876 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
HDAC4-204ENST00000446876 MYH11P35749 1972 aa16.46■□□□□ 0.22
HDAC4-204ENST00000446876 EYSQ5T1H1 3165 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 PRRC2BQ5JSZ5 2229 aaKnown RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 LRRIQ4A6NIV6 560 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 TBKBP1A7MCY6 615 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 INO80B-WBP1J3KQ70 363 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 ATF7P17544 494 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 CTNNB1P35222 781 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 MBTD1Q05BQ5 628 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 LONRF3Q496Y0 759 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 EPC2Q52LR7 807 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 SPECC1Q5M775 1068 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 HYIQ5T013 277 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 TWF2Q6IBS0 349 aaKnown RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 CMTR2Q8IYT2 770 aaKnown RBP16.45■□□□□ 0.22
HDAC4-204ENST00000446876 LRRC15Q8TF66 581 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 TMEM161AQ9NX61 479 aa16.45■□□□□ 0.22
HDAC4-204ENST00000446876 FBXO2Q9UK22 296 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms