RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CPB2Q96IY4 423 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 TIGD1Q96MW7 591 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 DNAJC25Q9H1X3 360 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 CUEDC2Q9H467 287 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 MINDY3Q9H8M7 445 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 KMT5AQ9NQR1 393 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 PDLIM7Q9NR12 457 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 USP25Q9UHP3 1055 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 CTNND2Q9UQB3 1225 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 CDY2AQ9Y6F7 541 aa8.35□□□□□ -1.07
SF3A3P1-201ENST00000446317 MKI67P46013 3256 aaKnown RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 DENND3A2RUS2 1198 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 TRIM49BA6NDI0 452 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 INO80B-WBP1J3KQ70 363 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 CABYRO75952 493 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 SMC2O95347 1197 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 GHRP10912 638 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 COL6A1P12109 1028 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 XRCC6P12956 609 aaKnown RBP eCLIP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 PLS3P13797 630 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 PTMSP20962 102 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 MUTP22033 750 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 GUCY2CP25092 1073 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 DNM2P50570 870 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 ADAM17P78536 824 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 TYRO3Q06418 890 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 SEZ6Q53EL9 994 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 FAM26FQ5R3K3 315 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 SASS6Q6UVJ0 657 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 UNC13DQ70J99 1090 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 ZBTB33Q86T24 672 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 IFT74Q96LB3 600 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 MAP7D2Q96T17 732 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 PYM1Q9BRP8 204 aaKnown RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 INO80BQ9C086 356 aaPredicted RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 PARVGQ9HBI0 331 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 RNF19AQ9NV58 838 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 HOOK1Q9UJC3 728 aaKnown RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 ZMYND8Q9ULU4 1186 aaPredicted RBP8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 PCDHA2Q9Y5H9 948 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 COL1A2P08123 1366 aa8.34□□□□□ -1.07
SF3A3P1-201ENST00000446317 IGKV6-21A0A0C4DH24 114 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 CLIC2O15247 247 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 SLC26A4O43511 780 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 CHRNA1P02708 482 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 IQCF3P0C7M6 154 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 GNAT1P11488 350 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 ITGB8P26012 769 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 PRCPP42785 496 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 MATR3P43243 847 aaKnown RBP eCLIP8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 CDK7P50613 346 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 GPC3P51654 580 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 FAAP100Q0VG06 881 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 DMP1Q13316 513 aaPredicted RBP8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 ANO6Q4KMQ2 910 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 IER5Q5VY09 327 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 TAS1R3Q7RTX0 852 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 SERINC5Q86VE9 423 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 TMEM130Q8N3G9 435 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 LINC01465Q8N7H1 131 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 ZSWIM2Q8NEG5 633 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 MCPH1Q8NEM0 835 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 BICD1Q96G01 975 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 ZBTB45Q96K62 511 aaPredicted RBP8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 FAM84AQ96KN4 292 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 MAGEF1Q9HAY2 307 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 TMEM39AQ9NV64 488 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 WDR81Q562E7 1941 aa8.33□□□□□ -1.08
SF3A3P1-201ENST00000446317 SMIM35A0A1B0GVV1 85 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 MBLAC1A4D2B0 266 aaPredicted RBP8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 GOLGA8IPA6NC78 632 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 GOLGA8JA6NMD2 632 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 ANKRD63C9JTQ0 380 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 MAGEB2O15479 319 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 GPR32O75388 356 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 CKBP12277 381 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 TMOD1P28289 359 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 CD52P31358 61 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 NLRP12P59046 1061 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 OSTNP61366 133 aa8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 MRPS6P82932 125 aaKnown RBP8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 NFX1Q12986 1120 aaKnown RBP8.32□□□□□ -1.08
SF3A3P1-201ENST00000446317 MORC3Q14149 939 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms