RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 SF3A1Q15459 793 aaKnown RBP15.06■□□□□ 0
GARNL3-208ENST00000444677 KCNK18Q7Z418 384 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 BRAPQ7Z569 592 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 EXOC8Q8IYI6 725 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 FIBCD1Q8N539 461 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 RNF149Q8NC42 400 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 TCP11Q8WWU5 503 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 CCDC43Q96MW1 224 aaKnown RBP15.06■□□□□ 0
GARNL3-208ENST00000444677 PNMA5Q96PV4 448 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 PLIN2Q99541 437 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
GARNL3-208ENST00000444677 PRDM6Q9NQX0 595 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 C1orf112Q9NSG2 853 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 DDX19AQ9NUU7 478 aaKnown RBP15.06■□□□□ 0
GARNL3-208ENST00000444677 RNF19AQ9NV58 838 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 HCSTQ9UBK5 93 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 LRFN2Q9ULH4 789 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 PCDHB7Q9Y5E2 793 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 CLIC4Q9Y696 253 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
GARNL3-208ENST00000444677 ARHGEF35A5YM69 484 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 STAG3L1P0CL83 205 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 CAPSQ13938 189 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 BTG3Q14201 252 aaPredicted RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 ZRSR1Q15695 479 aaKnown RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 EPC2Q52LR7 807 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 FOXD4L5Q5VV16 416 aaPredicted RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 KRT79Q5XKE5 535 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 HAUS3Q68CZ6 603 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 PADI6Q6TGC4 694 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 CATSPER4Q7RTX7 472 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 TMEM192Q8IY95 271 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 MICALL1Q8N3F8 863 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 FOXD4L4Q8WXT5 416 aaPredicted RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 BHMT2Q9H2M3 363 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 MTCH2Q9Y6C9 303 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 MRPL42Q9Y6G3 142 aaKnown RBP15.05■□□□□ -0
GARNL3-208ENST00000444677 ADGRA3Q8IWK6 1321 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 LOXHD1Q8IVV2 1947 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 CHD9Q3L8U1 2897 aa15.05■□□□□ -0
GARNL3-208ENST00000444677 TBKBP1A7MCY6 615 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 ASAP2O43150 1006 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 STX6O43752 255 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 GAS2O43903 313 aaKnown RBP15.04■□□□□ -0
GARNL3-208ENST00000444677 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
GARNL3-208ENST00000444677 LONRF3Q496Y0 759 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 ECHDC2Q86YB7 292 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 RNF169Q8NCN4 708 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 FBXO22Q8NEZ5 403 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 BSNDQ8WZ55 320 aa15.04■□□□□ -0
GARNL3-208ENST00000444677 INO80BQ9C086 356 aaPredicted RBP15.04■□□□□ -0
GARNL3-208ENST00000444677 PIN4Q9Y237 131 aaKnown RBP15.04■□□□□ -0
GARNL3-208ENST00000444677 NLRC5Q86WI3 1866 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
GARNL3-208ENST00000444677 CYP11B2P19099 503 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 MUTP22033 750 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 SFPQP23246 707 aaKnown RBP eCLIP15.03■□□□□ -0
GARNL3-208ENST00000444677 HOXA11P31270 313 aaPredicted RBP15.03■□□□□ -0
GARNL3-208ENST00000444677 BMPR1AP36894 532 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 PTENP60484 403 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 PTPAQ15257 358 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
GARNL3-208ENST00000444677 LRRC15Q8TF66 581 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 RAB34Q9BZG1 259 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 TMEM161AQ9NX61 479 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 CHD7Q9P2D1 2997 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 WDR81Q562E7 1941 aa15.03■□□□□ -0
GARNL3-208ENST00000444677 A0A0U1RQF3 1178 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 MEIS3P2A8K0S8 358 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 EYA4O95677 639 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 MARCKSP29966 332 aaPredicted RBP15.02■□□□□ -0
GARNL3-208ENST00000444677 CTNNB1P35222 781 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 PHKA2P46019 1235 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 GPM6BQ13491 265 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 MXD4Q14582 209 aaPredicted RBP15.02■□□□□ -0
GARNL3-208ENST00000444677 AMHR2Q16671 573 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 UBXN11Q5T124 520 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 ZNF598Q86UK7 904 aaKnown RBP15.02■□□□□ -0
GARNL3-208ENST00000444677 CMTR2Q8IYT2 770 aaKnown RBP15.02■□□□□ -0
GARNL3-208ENST00000444677 LPPQ93052 612 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 CPB2Q96IY4 423 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 CASD1Q96PB1 797 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 USP28Q96RU2 1077 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 ELAC1Q9H777 363 aaKnown RBP15.02■□□□□ -0
GARNL3-208ENST00000444677 CHST12Q9NRB3 414 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 DNM3Q9UQ16 869 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 USP20Q9Y2K6 914 aa15.02■□□□□ -0
GARNL3-208ENST00000444677 COL4A6Q14031 1691 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 INO80B-WBP1J3KQ70 363 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 B4GALT5O43286 388 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 POU3F3P20264 500 aaPredicted RBP15.01□□□□□ -0.01
GARNL3-208ENST00000444677 MBTD1Q05BQ5 628 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 TFDP1Q14186 410 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 CLLU1OSQ5K130 101 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 SPECC1Q5M775 1068 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 HYIQ5T013 277 aa15.01□□□□□ -0.01
GARNL3-208ENST00000444677 TWF2Q6IBS0 349 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms