RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 KRT13P13646 458 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 FGFR4P22455 802 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 ATP2B4P23634 1241 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 DR1Q01658 176 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 EPHA7Q15375 998 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 FAM196AQ6ZSG2 479 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 TLCD1Q96CP7 247 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 THOC1Q96FV9 657 aaKnown RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 ZNF317Q96PQ6 595 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 AGAP1Q9UPQ3 857 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 COL24A1Q17RW2 1714 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 NRAPQ86VF7 1730 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 ATP6V1G2O95670 118 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 PAEPP09466 180 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 CLNS1AP54105 237 aaKnown RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 XRCC4Q13426 336 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 USH1GQ495M9 461 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 C15orf52Q6ZUT6 534 aaKnown RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 OTUD6AQ7L8S5 288 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 RASGEF1CQ8N431 466 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 CCDC197Q8NCU1 140 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 ALG3Q92685 438 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 MIEF2Q96C03 454 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 SUCLA2Q9P2R7 463 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-218ENST00000442625 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 PLIN4Q96Q06 1357 aa15.28■□□□□ 0.04
MCF2L-218ENST00000442625 CCDC188H7C350 402 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 CES2O00748 559 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 RGL2O15211 777 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 EVI5O60447 810 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 GCNT3O95395 438 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 CACNB3P54284 484 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 ZFPM1Q8IX07 1006 aa15.27■□□□□ 0.04
MCF2L-218ENST00000442625 BTNL10A8MVZ5 291 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.03
MCF2L-218ENST00000442625 PPFIA2O75334 1257 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 NR3C1P04150 777 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 SPATA31C1P0DKV0 1188 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 PDE6BP35913 854 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 PMS2P54278 862 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 NFIAQ12857 509 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.03
MCF2L-218ENST00000442625 LACTB2Q53H82 288 aaPredicted RBP15.27■□□□□ 0.03
MCF2L-218ENST00000442625 FRMD5Q7Z6J6 570 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 CERS5Q8N5B7 392 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 CYP2W1Q8TAV3 490 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 ATXN2LQ8WWM7 1075 aaKnown RBP15.27■□□□□ 0.03
MCF2L-218ENST00000442625 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 SLITRK6Q9H5Y7 841 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 SLC24A3Q9HC58 644 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 ZDHHC18Q9NUE0 388 aa15.27■□□□□ 0.03
MCF2L-218ENST00000442625 EIF4E1BA6NMX2 242 aaKnown RBP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 SRRM3A6NNA2 597 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 C21orf2O43822 256 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 MGRN1O60291 552 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 EZRP15311 586 aaKnown RBP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 CREB1P16220 341 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 KCNJ2P63252 427 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 ARHGAP4P98171 946 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 MYO1EQ12965 1108 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 COG2Q14746 738 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 NAA25Q14CX7 972 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 OLIG1Q8TAK6 271 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 PRCCQ92733 491 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-218ENST00000442625 SLC35C1Q96A29 364 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 THAP2Q9H0W7 228 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 COG5Q9UP83 839 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 DNM3Q9UQ16 869 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 TRAF3IP3Q9Y228 551 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 NHSQ6T4R5 1651 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 ASTN1O14525 1302 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 A8MUI8 341 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 FAM86B1E9PN63 330 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 MEIS2O14770 477 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 LRRN2O75325 713 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 FAM86B2P0C5J1 330 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 CCDC25Q86WR0 208 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 KIF2BQ8N4N8 673 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 KCTD17Q8N5Z5 321 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 TXLNGYQ9BZA5 131 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 RGL1Q9NZL6 768 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 PTPN22Q9Y2R2 807 aa15.26■□□□□ 0.03
MCF2L-218ENST00000442625 DAAM1Q9Y4D1 1078 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms