RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CWH43Q9H720 699 aa21.15■□□□□ 0.98
HMGB3P22-201ENST00000442010 CHST12Q9NRB3 414 aa21.15■□□□□ 0.98
HMGB3P22-201ENST00000442010 HCSTQ9UBK5 93 aa21.15■□□□□ 0.98
HMGB3P22-201ENST00000442010 BDP1A6H8Y1 2624 aa21.14■□□□□ 0.98
HMGB3P22-201ENST00000442010 TNFRSF10AO00220 468 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 MCM7P33993 719 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 POLGP54098 1239 aaPredicted RBP21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 NEK9Q8TD19 979 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 NECAB3Q96P71 396 aaPredicted RBP21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 TRAIPQ9BWF2 469 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 XPNPEP1Q9NQW7 623 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 TYW1Q9NV66 732 aaKnown RBP21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 COL4A3BPQ9Y5P4 624 aa21.14■□□□□ 0.97
HMGB3P22-201ENST00000442010 POTEMA6NI47 508 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 SFPQP23246 707 aaKnown RBP eCLIP21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 ORC2Q13416 577 aaPredicted RBP21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 EMC2Q15006 297 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 LEXMQ3ZCV2 418 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 XKR9Q5GH70 373 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 CLLU1OSQ5K130 101 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 LRRC55Q6ZSA7 311 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 FAM184AQ8NB25 1140 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 PRPF31Q8WWY3 499 aaKnown RBP21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 NLRP4Q96MN2 994 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 INO80BQ9C086 356 aaPredicted RBP21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 DACT1Q9NYF0 836 aa21.13■□□□□ 0.97
HMGB3P22-201ENST00000442010 HOXA2O43364 376 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 GAS2O43903 313 aaKnown RBP21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 CD2BP2O95400 341 aaKnown RBP21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 EOMESO95936 686 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 SPATA31C1P0DKV0 1188 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 CTC1Q2NKJ3 1217 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 NOSTRINQ8IVI9 506 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 PSPC1Q8WXF1 523 aaKnown RBP21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 BMP2KQ9NSY1 1161 aaPredicted RBP21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 ANKEF1Q9NU02 776 aa21.12■□□□□ 0.97
HMGB3P22-201ENST00000442010 KCNA5P22460 613 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 U2AF2P26368 475 aaKnown RBP eCLIP21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 IRS1P35568 1242 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 LTBRP36941 435 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 LAMTOR4Q0VGL1 99 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 HYAL1Q12794 435 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 ZNF174Q15697 407 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 POF1BQ8WVV4 589 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 TCP11Q8WWU5 503 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 MTRQ99707 1265 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 MINDY3Q9H8M7 445 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
HMGB3P22-201ENST00000442010 ASAP2O43150 1006 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 ST18O60284 1047 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 XRCC6P12956 609 aaKnown RBP eCLIP21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 PHKA2P46019 1235 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 TRAPPC10P48553 1259 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 RARRES1P49788 294 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 TTC38Q5R3I4 469 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 SRGAP1Q7Z6B7 1085 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 C4orf32Q8N8J7 132 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 AAASQ9NRG9 546 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 AGPAT5Q9NUQ2 364 aa21.1■□□□□ 0.97
HMGB3P22-201ENST00000442010 NCK2O43639 380 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 ZNF623O75123 536 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 OR52Z1P0C646 297 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 SRGAP2CP0DJJ0 459 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 LAG3P18627 525 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 TOB1P50616 345 aaPredicted RBP21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 UBE3AQ05086 875 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 CATSPER3Q86XQ3 398 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 LRRC43Q8N309 656 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 TMX3Q96JJ7 454 aa21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 PIN4Q9Y237 131 aaKnown RBP21.09■□□□□ 0.97
HMGB3P22-201ENST00000442010 A0A087WWV3 80 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 MED24O75448 989 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 DGAT1O75907 488 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 FGF18O76093 207 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 HOXA11P31270 313 aaPredicted RBP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 GTF2F1P35269 517 aaKnown RBP eCLIP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 ARL2P36404 184 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 TECP42680 631 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 SPOUT1Q5T280 376 aaKnown RBP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 ADGRD2Q7Z7M1 963 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 IFNLR1Q8IU57 520 aaPredicted RBP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 RNF149Q8NC42 400 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 RNF169Q8NCN4 708 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 PIGOQ8TEQ8 1089 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 TBC1D32Q96NH3 1257 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 POLR3CQ9BUI4 534 aaPredicted RBP21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 TUFT1Q9NNX1 390 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 FAM105AQ9NUU6 356 aa21.08■□□□□ 0.97
HMGB3P22-201ENST00000442010 CSPG5O95196 566 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms