RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 SLC32A1Q9H598 525 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 TELO2Q9Y4R8 837 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 COL5A1P20908 1838 aaPredicted RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 TSC2P49815 1807 aa12.97□□□□□ -0.33
RTN4-211ENST00000438462 ABCA12Q86UK0 2595 aa12.97□□□□□ -0.33
RTN4-211ENST00000438462 CAPN9O14815 690 aa12.97□□□□□ -0.33
RTN4-211ENST00000438462 RPP40O75818 363 aaKnown RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 RPLP2P05387 115 aaKnown RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
RTN4-211ENST00000438462 RAB44Q7Z6P3 723 aaPredicted RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
RTN4-211ENST00000438462 BCL7CQ8WUZ0 217 aaPredicted RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 DNAJC2Q99543 621 aaKnown RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 CELF4Q9BZC1 486 aaKnown RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
RTN4-211ENST00000438462 ENO4A6NNW6 628 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 CDX4O14627 284 aaPredicted RBP12.96□□□□□ -0.33
RTN4-211ENST00000438462 GNAI3P08754 354 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 RDXP35241 583 aaKnown RBP12.96□□□□□ -0.33
RTN4-211ENST00000438462 CCR10P46092 362 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 IGBP1P78318 339 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 SPEM1Q8N4L4 309 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 PIP4K2CQ8TBX8 421 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 VN1R3Q9BXE9 311 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 ADAMTS10Q9H324 1103 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 CDH7Q9ULB5 785 aa12.96□□□□□ -0.33
RTN4-211ENST00000438462 EML5Q05BV3 1969 aa12.96□□□□□ -0.34
RTN4-211ENST00000438462 A0A087WV48 116 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 CAPN8A6NHC0 703 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 ZC3H11AO75152 810 aaKnown RBP eCLIP12.95□□□□□ -0.34
RTN4-211ENST00000438462 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 FSHRP23945 695 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 MARK3P27448 753 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 ABCG1P45844 678 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 FAM189BP81408 668 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 TFAP4Q01664 338 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 COLEC12Q5KU26 742 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 ELMSAN1Q6PJG2 1045 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 C2orf42Q9NWW7 574 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
RTN4-211ENST00000438462 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
RTN4-211ENST00000438462 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
RTN4-211ENST00000438462 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 CAVIN2O95810 425 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 TGFB3P10600 412 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 SP4Q02446 784 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 CREB5Q02930 508 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 CYFIP1Q7L576 1253 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 IGSF21Q96ID5 467 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 ST3GAL5Q9UNP4 418 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
RTN4-211ENST00000438462 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
RTN4-211ENST00000438462 NMT2O60551 498 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 GLUD1P00367 558 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 CHRNB1P11230 501 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 KRT76Q01546 638 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 RNF169Q8NCN4 708 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
RTN4-211ENST00000438462 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 FAM3CQ92520 227 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 FGF13Q92913 245 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 NT5C3AQ9H0P0 336 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 DPP7Q9UHL4 492 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 NBPF19A0A087WUL8 3843 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 CACNA1EQ15878 2313 aa12.93□□□□□ -0.34
RTN4-211ENST00000438462 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
RTN4-211ENST00000438462 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
RTN4-211ENST00000438462 SURF6O75683 361 aaKnown RBP12.92□□□□□ -0.34
RTN4-211ENST00000438462 PAPLNO95428 1278 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 SPATA31D3P0C874 917 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
RTN4-211ENST00000438462 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
RTN4-211ENST00000438462 Q6ZS52 159 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 SPATA31D4Q6ZUB0 917 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 HELQQ8TDG4 1101 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 NUP205Q92621 2012 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 MAF1Q9H063 256 aa12.92□□□□□ -0.34
RTN4-211ENST00000438462 ABCB11O95342 1321 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 PCNX2A6NKB5 2137 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 C2CD2LO14523 706 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 HOXA6P31267 233 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 PTGDRQ13258 359 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 ZNF423Q2M1K9 1284 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 SCUBE3Q8IX30 993 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms