RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 WDR44Q5JSH3 913 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 PNKPQ96T60 521 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 PNMA2Q9UL42 364 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 ASTN1O14525 1302 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 CCDC151A5D8V7 595 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 SPOPO43791 374 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 UGCGQ16739 394 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 FAM84AQ96KN4 292 aa13.21□□□□□ -0.29
CLDN4-203ENST00000435050 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
CLDN4-203ENST00000435050 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLDN4-203ENST00000435050 EVI5O60447 810 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 PLS3P13797 630 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 LMNB1P20700 586 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 SFNP31947 248 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 KCTD2Q14681 263 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 MAATS1Q7Z4T9 603 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 LAMB1P07942 1786 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 RASSF10A6NK89 507 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 ZNF263O14978 683 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 PRKCEQ02156 737 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 BFSP1Q12934 665 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.3
CLDN4-203ENST00000435050 SLC35C1Q96A29 364 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 CDHR1Q96JP9 859 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 POP1Q99575 1024 aaKnown RBP13.21□□□□□ -0.3
CLDN4-203ENST00000435050 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.3
CLDN4-203ENST00000435050 VPS33BQ9H267 617 aa13.21□□□□□ -0.3
CLDN4-203ENST00000435050 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.3
CLDN4-203ENST00000435050 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 ESYT3A0FGR9 886 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-203ENST00000435050 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-203ENST00000435050 BAP1Q92560 729 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 MBOAT7Q96N66 472 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
CLDN4-203ENST00000435050 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 OLFML3Q9NRN5 406 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 GUCY2DQ02846 1103 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 MESDQ14696 234 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 ZCWPW2Q504Y3 356 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 CBWD2Q8IUF1 395 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 CLEC4DQ8WXI8 215 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 IMPG2Q9BZV3 1241 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
CLDN4-203ENST00000435050 SSU72P8A0A1W2PR75 194 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 K7ERI5 159 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 PGK2P07205 417 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 TNNC1P63316 161 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 AMFRQ9UKV5 643 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
CLDN4-203ENST00000435050 ACTR2P61160 394 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 TUBB4BP68371 445 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ZNF302Q9NR11 478 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLDN4-203ENST00000435050 DSG3P32926 999 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ACOT2P49753 483 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
CLDN4-203ENST00000435050 SEZ6Q53EL9 994 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ZNF571Q7Z3V5 609 aaPredicted RBP13.19□□□□□ -0.3
CLDN4-203ENST00000435050 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ATP6V0A4Q9HBG4 840 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 SRCAPQ6ZRS2 3230 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
CLDN4-203ENST00000435050 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
CLDN4-203ENST00000435050 MMP14P50281 582 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 CBWD6Q4V339 395 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 CBWD3Q5JTY5 395 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 CBWD5Q5RIA9 395 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 ZNF536O15090 1300 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 FRMPD4Q14CM0 1322 aa13.19□□□□□ -0.3
CLDN4-203ENST00000435050 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 KRT19P08727 400 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-203ENST00000435050 DLG4P78352 724 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-203ENST00000435050 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 KRIT1O00522 736 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 SLC26A4O43511 780 aa13.18□□□□□ -0.3
CLDN4-203ENST00000435050 SOX5P35711 763 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms