RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 EPXP11678 715 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 DPEP1P16444 411 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 GAP43P17677 238 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 TCP1P17987 556 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 SCNN1DP51172 638 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 UBE2SQ16763 222 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 BEND6Q5SZJ8 279 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 TAF3Q5VWG9 929 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 TTBK2Q6IQ55 1244 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PDXDC1Q6P996 788 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 EPM2AIP1Q7L775 607 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 HDXQ7Z353 690 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 FRMD5Q7Z6J6 570 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 C2CD5Q86YS7 1000 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 NEK11Q8NG66 645 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 NEK9Q8TD19 979 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 TMEM174Q8WUU8 243 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 LENG9Q96B70 501 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PKNOX2Q96KN3 472 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PSMD1Q99460 953 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PLIN2Q99541 437 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 KCTD10Q9H3F6 313 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 METTL14Q9HCE5 456 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 TUFT1Q9NNX1 390 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 PNMA2Q9UL42 364 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 L1RE1Q9UN81 338 aa8.18□□□□□ -1.1
COL17A1-204ENST00000433822 BZW2Q9Y6E2 419 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
COL17A1-204ENST00000433822 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 CES2O00748 559 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 CETN3O15182 167 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 BNIP3LO60238 219 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 MARCH6O60337 910 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 GFPT2O94808 682 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 NDUFB10O96000 172 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 SERPING1P05155 500 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 ARAFP10398 606 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 HSPA8P11142 646 aaKnown RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 BMP3P12645 472 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 IDEP14735 1019 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 CTCFP49711 727 aaPredicted RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 KIF11P52732 1056 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 USP14P54578 494 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 CTBSQ01459 385 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 PPP2R5CQ13362 524 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 MYBPC2Q14324 1141 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 LONRF2Q1L5Z9 754 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 SLC9C1Q4G0N8 1177 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 KCTD1Q719H9 257 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 FAM83AQ86UY5 434 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 SECISBP2LQ93073 1101 aaKnown RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 IFIH1Q9BYX4 1025 aaKnown RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 MAF1Q9H063 256 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 MAP3K20Q9NYL2 800 aaKnown RBP8.17□□□□□ -1.1
COL17A1-204ENST00000433822 AIPL1Q9NZN9 384 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 TMOD2Q9NZR1 351 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 ARHGAP20Q9P2F6 1191 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 PRDM4Q9UKN5 801 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 DNM3Q9UQ16 869 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 TMX2Q9Y320 296 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 CNTNAP1P78357 1384 aa8.17□□□□□ -1.1
COL17A1-204ENST00000433822 TRAF5O00463 557 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 PES1O00541 588 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 COBLO75128 1261 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 EYA4O95677 639 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 KCNA3P22001 575 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 RPL13P26373 211 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 TNFRSF8P28908 595 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 SLC16A2P36021 539 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 PRKCIP41743 596 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 DGKGP49619 791 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 STAT2P52630 851 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 ECM1Q16610 540 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 KNOP1Q1ED39 458 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC40Q4G0X9 1142 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 GLE1Q53GS7 698 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 CCDC70Q6NSX1 233 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 FIGNL1Q6PIW4 674 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 NIPA1Q7RTP0 329 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 DYMQ7RTS9 669 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 GPBP1Q86WP2 473 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 RNF135Q8IUD6 432 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 CLEC10AQ8IUN9 316 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 EIF1ADQ8N9N8 165 aaKnown RBP8.16□□□□□ -1.1
COL17A1-204ENST00000433822 CHURC1Q8WUH1 139 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 SCFD1Q8WVM8 642 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 FAM151AQ8WW52 585 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 GMLQ99445 158 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
COL17A1-204ENST00000433822 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms