RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 CLIP3Q96DZ5 547 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 PAGE5Q96GU1 130 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 PNMA5Q96PV4 448 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 HSD17B14Q9BPX1 270 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TINF2Q9BSI4 451 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TRIM4Q9C037 500 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 YIPF3Q9GZM5 350 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 L2HGDHQ9H9P8 463 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TUFT1Q9NNX1 390 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 SLC9A2Q9UBY0 812 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.53□□□□□ -0.88
NUP98-207ENST00000429801 PCDHGC5Q9Y5F6 944 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 CAPN7Q9Y6W3 813 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 FAM169AQ9Y6X4 670 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 MED24O75448 989 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 FLT3P36888 993 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TRPC1P48995 793 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 AMPD3Q01432 767 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TTLL4Q14679 1199 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 NAALADL2Q58DX5 795 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 C14orf80Q86SX3 495 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 FBXO16Q8IX29 292 aaPredicted RBP9.53□□□□□ -0.88
NUP98-207ENST00000429801 NPLOC4Q8TAT6 608 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 SCFD2Q8WU76 684 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 TCP11Q8WWU5 503 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 APBA2Q99767 749 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 ABHD16BQ9H3Z7 469 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
NUP98-207ENST00000429801 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 PLXNA1Q9UIW2 1896 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 GJD2Q9UKL4 321 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 FAN1Q9Y2M0 1017 aa9.53□□□□□ -0.88
NUP98-207ENST00000429801 LRRC37A2A6NM11 1700 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 POTEB3A0JP26 581 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 P4HBP07237 508 aaKnown RBP9.52□□□□□ -0.88
NUP98-207ENST00000429801 FAM200BP0CF97 657 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 UBA1P22314 1058 aaKnown RBP9.52□□□□□ -0.88
NUP98-207ENST00000429801 AFMP43652 599 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.88
NUP98-207ENST00000429801 SP2Q02086 613 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 CYP4A11Q02928 519 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 CWF19L1Q69YN2 538 aaKnown RBP9.52□□□□□ -0.88
NUP98-207ENST00000429801 POTEBQ6S5H4 581 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 SV2BQ7L1I2 683 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 SH3RF1Q7Z6J0 888 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 CEP57Q86XR8 500 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 USP33Q8TEY7 942 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.88
NUP98-207ENST00000429801 SLC39A2Q9NP94 309 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 SAGE1Q9NXZ1 904 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 DNM3Q9UQ16 869 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 PCDHA10Q9Y5I2 948 aa9.52□□□□□ -0.88
NUP98-207ENST00000429801 RNF8O76064 485 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 SLITRK3O94933 977 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 CCDC192P0DO97 292 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 MYCLP1P12525 358 aaPredicted RBP9.52□□□□□ -0.89
NUP98-207ENST00000429801 CYP2B6P20813 491 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 FNTAP49354 379 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 PNOCQ13519 176 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 ECM1Q16610 540 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 ZNF394Q53GI3 561 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 CYFIP1Q7L576 1253 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 HOOK3Q86VS8 718 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 TPH2Q8IWU9 490 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 RAD54LQ92698 747 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 DYDC2Q96IM9 177 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 PDE11AQ9HCR9 933 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 HOMER3Q9NSC5 361 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 KBTBD4Q9NVX7 518 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 UBAP1Q9NZ09 502 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 KIAA1217Q5T5P2 1943 aa9.52□□□□□ -0.89
NUP98-207ENST00000429801 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 DKC1O60832 514 aaKnown RBP eCLIP9.51□□□□□ -0.89
NUP98-207ENST00000429801 SNAI1O95863 264 aaPredicted RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 CCNE2O96020 404 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 PSAPP07602 524 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 HSPA6P17066 643 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CDR1P51861 262 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 INHBCP55103 352 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CTTNQ14247 550 aaKnown RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 MIS18BP1Q6P0N0 1132 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 METTL7BQ6UX53 244 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 SYCP3Q8IZU3 236 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 SLC35B4Q969S0 331 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 RBM41Q96IZ5 413 aaKnown RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 ZSWIM4Q9H7M6 989 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms