RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 AKT1S1Q96B36 256 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 LENG9Q96B70 501 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 RSRC1Q96IZ7 334 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 CCDC114Q96M63 670 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 P2RX7Q99572 595 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 SH3GL3Q99963 347 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 EPB41L4BQ9H329 900 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 SLC24A3Q9HC58 644 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 USP40Q9NVE5 1235 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 RGPD3A6NKT7 1758 aaPredicted RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 NR3C1P04150 777 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 KRT18P05783 430 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 CASP4P49662 377 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 GALCP54803 685 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 PICALMQ13492 652 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 SPRED3Q2MJR0 410 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 QRICH1Q2TAL8 776 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 RGPD4Q7Z3J3 1758 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 VPS36Q86VN1 386 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 CENPTQ96BT3 561 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 LRRC4CQ9HCJ2 640 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 SPATS2LQ9NUQ6 558 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 NOVA2Q9UNW9 492 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 DIS3Q9Y2L1 958 aaKnown RBP9.57□□□□□ -0.88
CDH13-202ENST00000428848 NR2E1Q9Y466 385 aa9.57□□□□□ -0.88
CDH13-202ENST00000428848 ANKRD31Q8N7Z5 1873 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 SIPA1L1O43166 1804 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DCDC2CA8MYV0 355 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 H0YIN7 160 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 TMEM253P0C7T8 217 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 PTENP60484 403 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 ADCY2Q08462 1091 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 XRCC4Q13426 336 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 PLS1Q14651 629 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 SLMAPQ14BN4 828 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 PTPROQ16827 1216 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 ANKRD20A8PQ5CZ79 823 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DCAF12L1Q5VU92 463 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DUPD1Q68J44 220 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 GJB7Q6PEY0 223 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 KCTD1Q719H9 257 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 FAM228AQ86W67 206 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 SEC16BQ96JE7 1060 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 CELF4Q9BZC1 486 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 ZDHHC18Q9NUE0 388 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 GCNT4Q9P109 453 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 TPX2Q9ULW0 747 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 DNM3Q9UQ16 869 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 FRMPD4Q14CM0 1322 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DNM1LO00429 736 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 TGFB1I1O43294 461 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 BUB1BO60566 1050 aaPredicted RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 NPM3O75607 178 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 MMP10P09238 476 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 NUDT17P0C025 328 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DRD4P21917 467 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 RPL13P26373 211 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 STAT1P42224 750 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 EIF3BP55884 814 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 MAGOHP61326 146 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH13-202ENST00000428848 PPP2R5EQ16537 467 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 DAAM2Q86T65 1068 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 SUPT20HQ8NEM7 779 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 RFFLQ8WZ73 363 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 MAGOHBQ96A72 148 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 UIMC1Q96RL1 719 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 GPR88Q9GZN0 384 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 CARD9Q9H257 536 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 ZHX3Q9H4I2 956 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 CNOT10Q9H9A5 744 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 OLFML3Q9NRN5 406 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 HOMER3Q9NSC5 361 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 UTP11Q9Y3A2 253 aaKnown RBP9.56□□□□□ -0.88
CDH13-202ENST00000428848 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
CDH13-202ENST00000428848 IGSF9BQ9UPX0 1349 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 RSPH10B2B2RC85 870 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 F8W031 263 aaPredicted RBP9.55□□□□□ -0.88
CDH13-202ENST00000428848 MGRN1O60291 552 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 EVI5O60447 810 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 FGGP02679 453 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 RSPH10BP0C881 870 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 CIITAP33076 1130 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 SOX5P35711 763 aa9.55□□□□□ -0.88
CDH13-202ENST00000428848 CCNHP51946 323 aaPredicted RBP9.55□□□□□ -0.88
CDH13-202ENST00000428848 DRG2P55039 364 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms