RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 NETO1Q8TDF5 533 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 TNPO1Q92973 898 aaKnown RBP13.62□□□□□ -0.23
DDX39B-208ENST00000428098 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 CHMP4BQ9H444 224 aaKnown RBP13.62□□□□□ -0.23
DDX39B-208ENST00000428098 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-208ENST00000428098 GCN1Q92616 2671 aaKnown RBP13.62□□□□□ -0.23
DDX39B-208ENST00000428098 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 CLUHO75153 1309 aa13.62□□□□□ -0.23
DDX39B-208ENST00000428098 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 PIK3CDO00329 1044 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39B-208ENST00000428098 RFPL2O75678 378 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 ATG7O95352 703 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39B-208ENST00000428098 PROS1P07225 676 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 ATP4AP20648 1035 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 SHC2P98077 582 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-208ENST00000428098 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 JADE2Q9NQC1 790 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 MAN1C1Q9NR34 630 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
DDX39B-208ENST00000428098 DSPP15924 2871 aaKnown RBP13.6□□□□□ -0.23
DDX39B-208ENST00000428098 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 HBP1O60381 514 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-208ENST00000428098 FZD5Q13467 585 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 CYB5R4Q7L1T6 521 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 SHDQ96IW2 340 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 EMILIN2Q9BXX0 1053 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 ADAMTS10Q9H324 1103 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 GMEB2Q9UKD1 530 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
DDX39B-208ENST00000428098 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 MIA3Q5JRA6 1907 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 INPPL1O15357 1258 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 MAFGO15525 162 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 C22orf31O95567 290 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 CCNE2O96020 404 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 SPATA31D3P0C874 917 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 FGFR4P22455 802 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 KCNA4P22459 653 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 SLC11A1P49279 550 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 NT5C2P49902 561 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-208ENST00000428098 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 PARM1Q6UWI2 310 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 SPATA31D4Q6ZUB0 917 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 STAMQ92783 540 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 FGF14Q92915 247 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 CUL5Q93034 780 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 CLDN23Q96B33 292 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 ZNF668Q96K58 619 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-208ENST00000428098 RHOBTB2Q9BYZ6 727 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 KCNH7Q9NS40 1196 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 ZMIZ1Q9ULJ6 1067 aa13.59□□□□□ -0.23
DDX39B-208ENST00000428098 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 MEIS3P2A8K0S8 358 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 TM4SF5O14894 197 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 TDGF1P13385 188 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
DDX39B-208ENST00000428098 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
DDX39B-208ENST00000428098 ZNF484Q5JVG2 852 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 ZNF280BQ86YH2 543 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 SMG7Q92540 1137 aaKnown RBP13.58□□□□□ -0.24
DDX39B-208ENST00000428098 LPPQ93052 612 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
DDX39B-208ENST00000428098 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 SEMA4GQ9NTN9 838 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.24
DDX39B-208ENST00000428098 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX39B-208ENST00000428098 SHISA7A6NL88 538 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 CCER2I3L3R5 266 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
DDX39B-208ENST00000428098 PAPLNO95428 1278 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 C1QTNF9P0C862 333 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 SLC26A2P50443 739 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 TROAPQ12815 778 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 MLF2Q15773 248 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-208ENST00000428098 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 METTL13Q8N6R0 699 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
DDX39B-208ENST00000428098 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-208ENST00000428098 C2CD2LO14523 706 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 TEX28O15482 410 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 RETP07949 1114 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 CLCN3P51790 818 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 UBE2SQ16763 222 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 ZBTB41Q5SVQ8 909 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms