RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PLAGL2Q9UPG8 496 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 PCDHB6Q9Y5E3 794 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 LOXHD1Q8IVV2 1947 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 BMP1P13497 986 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 ATF7P17544 494 aaPredicted RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 DNAJB1P25685 340 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 RARRES1P49788 294 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 PTPROQ16827 1216 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 LRRC55Q6ZSA7 311 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 FERMT3Q86UX7 667 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 SPPL3Q8TCT6 385 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 PSPC1Q8WXF1 523 aaKnown RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 C11orf84Q9BUA3 381 aaPredicted RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 CWH43Q9H720 699 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 ALG13Q9NP73 1137 aaKnown RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 CHST12Q9NRB3 414 aa20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
SMARCAL1-205ENST00000425815 SRGAP2CP0DJJ0 459 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 GNL2Q13823 731 aaKnown RBP20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 ECM1Q16610 540 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 KLHL23Q8NBE8 558 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 P2RX5Q93086 422 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 HLA-CQ95604 372 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 MTRQ99707 1265 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 POLR3CQ9BUI4 534 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 TRAIPQ9BWF2 469 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 INO80BQ9C086 356 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 TUFT1Q9NNX1 390 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 RNF216Q9NWF9 866 aaPredicted RBP20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 COG5Q9UP83 839 aa20.45■□□□□ 0.86
SMARCAL1-205ENST00000425815 ASAP2O43150 1006 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 GAS2O43903 313 aaKnown RBP20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 ITGB1P05556 798 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 ARL2P36404 184 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 IL17AQ16552 155 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 TCEAL5Q5H9L2 206 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 CLLU1OSQ5K130 101 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 ASAP3Q8TDY4 903 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 TCP11Q8WWU5 503 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 TMEM117Q9H0C3 514 aa20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 NOL7Q9UMY1 257 aaKnown RBP20.44■□□□□ 0.86
SMARCAL1-205ENST00000425815 DGAT1O75907 488 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 EOMESO95936 686 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 SFPQP23246 707 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 RPA1P27694 616 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 HOXA11P31270 313 aaPredicted RBP20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 FXR2P51116 673 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 KCNQ1P51787 676 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 PTGDRQ13258 359 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 NAALADL2Q58DX5 795 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 SRGAP1Q7Z6B7 1085 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 RNF149Q8NC42 400 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 DACT1Q9NYF0 836 aa20.43■□□□□ 0.86
SMARCAL1-205ENST00000425815 PHKA2P46019 1235 aa20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 CUL4AQ13619 759 aa20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 COL19A1Q14993 1142 aa20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 CATSPER4Q7RTX7 472 aa20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 NSUN3Q9H649 340 aaKnown RBP20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 DBR1Q9UK59 544 aaKnown RBP20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 PIN4Q9Y237 131 aaKnown RBP20.42■□□□□ 0.86
SMARCAL1-205ENST00000425815 MEIS3P2A8K0S8 358 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 GLRA2P23416 452 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 PTENP60484 403 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 PDIA5Q14554 519 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 TIGD5Q53EQ6 642 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 UBXN11Q5T124 520 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 MCTP1Q6DN14 999 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 POTEGQ6S5H5 508 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 IFNLR1Q8IU57 520 aaPredicted RBP20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 RNF169Q8NCN4 708 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 NACC1Q96RE7 527 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 AGPAT5Q9NUQ2 364 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 SMC3Q9UQE7 1217 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
SMARCAL1-205ENST00000425815 HOXA2O43364 376 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 ZNF623O75123 536 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 IRS1P35568 1242 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 POU5F1BQ06416 359 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 CAPSQ13938 189 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 MXD4Q14582 209 aaPredicted RBP20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 TWF2Q6IBS0 349 aaKnown RBP20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 IGSF22Q8N9C0 903 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 COLGALT1Q8NBJ5 622 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 HELQQ8TDG4 1101 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 POF1BQ8WVV4 589 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 LPPQ93052 612 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 UBE2ZQ9H832 354 aaPredicted RBP20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 GPRC5CQ9NQ84 441 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 FAM105AQ9NUU6 356 aa20.4■□□□□ 0.86
SMARCAL1-205ENST00000425815 USO1O60763 962 aaKnown RBP20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 HYAL1Q12794 435 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 AMHR2Q16671 573 aa20.39■□□□□ 0.85
SMARCAL1-205ENST00000425815 AAK1Q2M2I8 961 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms