RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NLRP4Q96MN2 994 aa17■□□□□ 0.31
USB1-202ENST00000423271 CASD1Q96PB1 797 aa17■□□□□ 0.31
USB1-202ENST00000423271 TMEM117Q9H0C3 514 aa17■□□□□ 0.31
USB1-202ENST00000423271 IGFLR1Q9H665 355 aa17■□□□□ 0.31
USB1-202ENST00000423271 CD320Q9NPF0 282 aa17■□□□□ 0.31
USB1-202ENST00000423271 LIMCH1Q9UPQ0 1083 aa17■□□□□ 0.31
USB1-202ENST00000423271 C5orf42Q9H799 3197 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 ZBTB39O15060 712 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.311e-5■■■■□ 25.7
USB1-202ENST00000423271 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
USB1-202ENST00000423271 YWHABP31946 246 aaKnown RBP16.99■□□□□ 0.31
USB1-202ENST00000423271 CALCRLQ16602 461 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 CLLU1OSQ5K130 101 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
USB1-202ENST00000423271 ZNF410Q86VK4 478 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 TMEM143Q96AN5 459 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 JPH2Q9BR39 696 aaPredicted RBP16.99■□□□□ 0.31
USB1-202ENST00000423271 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
USB1-202ENST00000423271 PCDHB12Q9Y5F1 795 aa16.99■□□□□ 0.31
USB1-202ENST00000423271 A0A0U1RQF3 1178 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 ST18O60284 1047 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 NEMFO60524 1076 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 TBX10O75333 385 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 FGF18O76093 207 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
USB1-202ENST00000423271 PBX3P40426 434 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 POLGP54098 1239 aaPredicted RBP16.98■□□□□ 0.31
USB1-202ENST00000423271 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 CLUL1Q15846 466 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 THNSL1Q8IYQ7 743 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 SLC7A3Q8WY07 619 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.31
USB1-202ENST00000423271 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
USB1-202ENST00000423271 ZSWIM4Q9H7M6 989 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 AAASQ9NRG9 546 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
USB1-202ENST00000423271 HOXA2O43364 376 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 NCK2O43639 380 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 SLITRK3O94933 977 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 CD2BP2O95400 341 aaKnown RBP16.97■□□□□ 0.31
USB1-202ENST00000423271 LAG3P18627 525 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 RFC5P40937 340 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 EMC2Q15006 297 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 XKR9Q5GH70 373 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 TPH2Q8IWU9 490 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 FAM178BQ8IXR5 827 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 ABI1Q8IZP0 508 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 LRRC43Q8N309 656 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 HELQQ8TDG4 1101 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 PRPF31Q8WWY3 499 aaKnown RBP16.97■□□□□ 0.31
USB1-202ENST00000423271 MTMR9Q96QG7 549 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 TTC12Q9H892 705 aaPredicted RBP16.97■□□□□ 0.31
USB1-202ENST00000423271 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 PCDHA12Q9UN75 941 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 PIN4Q9Y237 131 aaKnown RBP16.97■□□□□ 0.31
USB1-202ENST00000423271 PPME1Q9Y570 386 aa16.97■□□□□ 0.31
USB1-202ENST00000423271 TXKP42681 527 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 PHKA2P46019 1235 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 NRIP1P48552 1158 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 LONRF3Q496Y0 759 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 TWF2Q6IBS0 349 aaKnown RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 CATSPER4Q7RTX7 472 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 RBM23Q86U06 439 aaKnown RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 PSPC1Q8WXF1 523 aaKnown RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 LPPQ93052 612 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 C8orf76Q96K31 380 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 ZSCAN31Q96LW9 406 aaPredicted RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 HSD17B14Q9BPX1 270 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 INO80BQ9C086 356 aaPredicted RBP16.96■□□□□ 0.31
USB1-202ENST00000423271 MINDY3Q9H8M7 445 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 XPNPEP1Q9NQW7 623 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 TLR9Q9NR96 1032 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 CHST12Q9NRB3 414 aa16.96■□□□□ 0.31
USB1-202ENST00000423271 POTEMA6NI47 508 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 MEIS3P2A8K0S8 358 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 EOMESO95936 686 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 SRGAP2CP0DJJ0 459 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 MCM7P33993 719 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 ERVFC1P60507 584 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 UBE3AQ05086 875 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 LAMTOR4Q0VGL1 99 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 ADAM15Q13444 863 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
USB1-202ENST00000423271 PUS10Q3MIT2 529 aaKnown RBP16.95■□□□□ 0.3
USB1-202ENST00000423271 KCNT2Q6UVM3 1135 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 PPP2R3CQ969Q6 453 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
USB1-202ENST00000423271 A0A087WWV3 80 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 FSCN2O14926 492 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 LYPLA2O95372 231 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 GLP2RO95838 553 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 NDUFV1P49821 464 aa16.94■□□□□ 0.3
USB1-202ENST00000423271 CSPP1Q1MSJ5 1256 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms