RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 GLG1Q92896 1179 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 PCIF1Q9H4Z3 704 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
CDH1-202ENST00000422392 NOVA2Q9UNW9 492 aaKnown RBP17.14■□□□□ 0.33
CDH1-202ENST00000422392 FOXN3O00409 490 aaPredicted RBP17.13■□□□□ 0.33
CDH1-202ENST00000422392 CLSTN1O94985 981 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 ALDH1B1P30837 517 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 STAT2P52630 851 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 MYL7Q01449 175 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
CDH1-202ENST00000422392 PPATQ06203 517 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 LRIG3Q6UXM1 1119 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 B4GALNT4Q76KP1 1039 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 HS2ST1Q7LGA3 356 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 CCDC26Q8TAB7 109 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDH1-202ENST00000422392 SH2D3AQ9BRG2 576 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 SYT11Q9BT88 431 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 INTUQ9ULD6 942 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 UTP11Q9Y3A2 253 aaKnown RBP17.13■□□□□ 0.33
CDH1-202ENST00000422392 CAPN7Q9Y6W3 813 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 EXOC3O60645 756 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 LMNB1P20700 586 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 ANXA13P27216 316 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 NPEPPSP55786 919 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
CDH1-202ENST00000422392 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 ALG3Q92685 438 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 PRMT6Q96LA8 375 aaPredicted RBP17.13■□□□□ 0.33
CDH1-202ENST00000422392 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 TUFT1Q9NNX1 390 aa17.13■□□□□ 0.33
CDH1-202ENST00000422392 MEFVO15553 781 aaPredicted RBP17.12■□□□□ 0.33
CDH1-202ENST00000422392 TMEM253P0C7T8 217 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 TNFAIP3P21580 790 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 PRELPP51888 382 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
CDH1-202ENST00000422392 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 SYCP3Q8IZU3 236 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 OTUD6BQ8N6M0 293 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
CDH1-202ENST00000422392 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 SLC12A6Q9UHW9 1150 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 STK24Q9Y6E0 443 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 NCANO14594 1321 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 AFF2P51816 1311 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 PIK3CDO00329 1044 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 IFT88Q13099 833 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 RNF187Q5TA31 235 aaPredicted RBP17.12■□□□□ 0.33
CDH1-202ENST00000422392 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
CDH1-202ENST00000422392 ZNF746Q6NUN9 644 aaPredicted RBP17.12■□□□□ 0.33
CDH1-202ENST00000422392 TMEM110-MUSTN1A8MSY1 372 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 MAGOHP61326 146 aaKnown RBP17.11■□□□□ 0.33
CDH1-202ENST00000422392 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
CDH1-202ENST00000422392 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
CDH1-202ENST00000422392 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 MAGOHBQ96A72 148 aaKnown RBP17.11■□□□□ 0.33
CDH1-202ENST00000422392 LXNQ9BS40 222 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 DMAC2Q9NW81 257 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 HIP1RO75146 1068 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 FAM107AO95990 144 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 MMP10P09238 476 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 BFSP1Q12934 665 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 QPCTQ16769 361 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 MKNK1Q9BUB5 465 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 GOPCQ9HD26 462 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
CDH1-202ENST00000422392 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
CDH1-202ENST00000422392 TCP10L2B9ZVM9 353 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 ZNF131P52739 623 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 UBAP2Q5T6F2 1119 aaKnown RBP17.1■□□□□ 0.33
CDH1-202ENST00000422392 ICE2Q659A1 982 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 ARHGEF19Q8IW93 802 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 DAW1Q8N136 415 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 KRT35Q92764 455 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 FMO2Q99518 471 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
CDH1-202ENST00000422392 SHBGP04278 402 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 PTENP60484 403 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms