RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 LRRD1A4D1F6 860 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 TXNP10599 105 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 AP3M2P53677 418 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 INHBEP58166 350 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 COG7P83436 770 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 TOB2Q14106 344 aaPredicted RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 PSMD6Q15008 389 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 MAP3K21Q5TCX8 1036 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 TOGARAM2Q6ZUX3 1019 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 TMEM260Q9NX78 707 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 NR3C1P04150 777 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 VIL1P09327 827 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 ZNF18P17022 549 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 TMEM35BQ8NCS4 154 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 NYAP2Q9P242 653 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 GDAQ9Y2T3 454 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 DAAM1Q9Y4D1 1078 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 FLT1P17948 1338 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 STK25O00506 426 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 PSMA2P25787 234 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 ARHGAP25P42331 645 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 EFNA5P52803 228 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 FCGRTP55899 365 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 DYNLT1P63172 113 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 SATB1Q01826 763 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 IQCB1Q15051 598 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 RBBP5Q15291 538 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 EPHA7Q15375 998 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 SBK1Q52WX2 424 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 SCN4BQ8IWT1 228 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 ZDHHC15Q96MV8 337 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 LXNQ9BS40 222 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 PIDD1Q9HB75 910 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 KLHL14Q9P2G3 628 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 STRIP2Q9ULQ0 834 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 E9PMD0 336 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 SLC25A27O95847 323 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 EIF4A3P38919 411 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 LRRC31Q6UY01 552 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 C11orf57Q6ZUT1 292 aaPredicted RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 C15orf52Q6ZUT6 534 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 GDAP1Q8TB36 358 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 PPP2R3CQ969Q6 453 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 ATP6V1E2Q96A05 226 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 FAM213AQ9BRX8 229 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 NHEJ1Q9H9Q4 299 aaPredicted RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 GLI3P10071 1580 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 UBE2Q2LH0YL09 131 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 ZSCAN26Q16670 478 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 SLFNL1Q499Z3 407 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 RWDD4Q6NW29 188 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBR4-206ENST00000419533 TIPINQ9BVW5 301 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 JPH1Q9HDC5 661 aaPredicted RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 SAMSN1Q9NSI8 373 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 SLC4A1P02730 911 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 GUCY2DQ02846 1103 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 FAM83AQ86UY5 434 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 SGMS1Q86VZ5 419 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 TRIM42Q8IWZ5 723 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 ZNF560Q96MR9 790 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 CALB1P05937 261 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 COASYQ13057 564 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 NOGQ13253 232 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 SCYL3Q8IZE3 742 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 MTMR4Q9NYA4 1195 aa9.06□□□□□ -0.96
UBR4-206ENST00000419533 PDS5AQ29RF7 1337 aaKnown RBP9.06□□□□□ -0.96
UBR4-206ENST00000419533 GPC4O75487 556 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 TOMM70O94826 608 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 ZBED1O96006 694 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 KCNJ6P48051 423 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 STAT5BP51692 787 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 BASP1P80723 227 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 RSRC1Q96IZ7 334 aaKnown RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 TRIM62Q9BVG3 475 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 TUFT1Q9NNX1 390 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 ASNSD1Q9NWL6 643 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 HPCAL4Q9UM19 191 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 RGPD1P0DJD0 1748 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 POTECB2RU33 542 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 HGSO14964 777 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 BUB1BO60566 1050 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 NNMTP40261 264 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 SNX1Q13596 522 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 SH2D4BQ5SQS7 431 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
UBR4-206ENST00000419533 GLIS2Q9BZE0 524 aaPredicted RBP9.05□□□□□ -0.96
UBR4-206ENST00000419533 SMYD2Q9NRG4 433 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms