RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 POTEGQ6S5H5 508 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 FERMT3Q86UX7 667 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 IGSF22Q8N9C0 903 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 CCDC43Q96MW1 224 aaKnown RBP22.64■■□□□ 1.21
GTF3A-202ENST00000419181 ATP6V0A4Q9HBG4 840 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 PRDM6Q9NQX0 595 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 TMEM161AQ9NX61 479 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 RWDD3Q9Y3V2 267 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 A0A087WWV3 80 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 H3BNC9 293 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 ASAP2O43150 1006 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 BMPR1AP36894 532 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 PRPHP41219 470 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 PDIA5Q14554 519 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 HAUS3Q68CZ6 603 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 NACC1Q96RE7 527 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 CHST12Q9NRB3 414 aa22.63■■□□□ 1.21
GTF3A-202ENST00000419181 DBR1Q9UK59 544 aaKnown RBP22.63■■□□□ 1.21
GTF3A-202ENST00000419181 MRPL42Q9Y6G3 142 aaKnown RBP22.63■■□□□ 1.21
GTF3A-202ENST00000419181 MUTP22033 750 aa22.62■■□□□ 1.21
GTF3A-202ENST00000419181 CTNNB1P35222 781 aa22.62■■□□□ 1.21
GTF3A-202ENST00000419181 PAN2Q504Q3 1202 aaKnown RBP22.62■■□□□ 1.21
GTF3A-202ENST00000419181 COL25A1Q9BXS0 654 aaPredicted RBP22.62■■□□□ 1.21
GTF3A-202ENST00000419181 DACT1Q9NYF0 836 aa22.62■■□□□ 1.21
GTF3A-202ENST00000419181 LRWD1Q9UFC0 647 aa22.62■■□□□ 1.21
GTF3A-202ENST00000419181 A0A0U1RQF3 1178 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 RB1P06400 928 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 SRGAP2CP0DJJ0 459 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 ATP2C1P98194 919 aaPredicted RBP22.61■■□□□ 1.21
GTF3A-202ENST00000419181 GPM6BQ13491 265 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 MXD4Q14582 209 aaPredicted RBP22.61■■□□□ 1.21
GTF3A-202ENST00000419181 IL17AQ16552 155 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 FAM102BQ5T8I3 360 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 SRGAP1Q7Z6B7 1085 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 ECHDC2Q86YB7 292 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 RNF149Q8NC42 400 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 INTS4Q96HW7 963 aaKnown RBP22.61■■□□□ 1.21
GTF3A-202ENST00000419181 TRAIPQ9BWF2 469 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 RAB34Q9BZG1 259 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 THEGQ9P2T0 379 aa22.61■■□□□ 1.21
GTF3A-202ENST00000419181 K7ELQ4 463 aaPredicted RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 USO1O60763 962 aaKnown RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 FGFR1P11362 822 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 PDCP20941 246 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 ARL2P36404 184 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 CCT6AP40227 531 aaKnown RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 SKIV2LQ15477 1246 aaKnown RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 ECM1Q16610 540 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 CATSPER4Q7RTX7 472 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 C11orf84Q9BUA3 381 aaPredicted RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 MINDY3Q9H8M7 445 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 RNF19AQ9NV58 838 aa22.6■■□□□ 1.21
GTF3A-202ENST00000419181 PIN4Q9Y237 131 aaKnown RBP22.6■■□□□ 1.21
GTF3A-202ENST00000419181 ATG2AQ2TAZ0 1938 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 TBKBP1A7MCY6 615 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 POU5F1BQ06416 359 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 DTHD1Q6ZMT9 781 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 ZNF598Q86UK7 904 aaKnown RBP22.59■■□□□ 1.21
GTF3A-202ENST00000419181 ASAP3Q8TDY4 903 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 MRPL38Q96DV4 380 aaKnown RBP22.59■■□□□ 1.21
GTF3A-202ENST00000419181 PLVAPQ9BX97 442 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 AGPAT5Q9NUQ2 364 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 STK24Q9Y6E0 443 aa22.59■■□□□ 1.21
GTF3A-202ENST00000419181 HOXA2O43364 376 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 ATF7P17544 494 aaPredicted RBP22.58■■□□□ 1.21
GTF3A-202ENST00000419181 GLRA2P23416 452 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 PHKA2P46019 1235 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 PTENP60484 403 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 CAPSQ13938 189 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 PTPROQ16827 1216 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 BRAPQ7Z569 592 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 IFNLR1Q8IU57 520 aaPredicted RBP22.58■■□□□ 1.21
GTF3A-202ENST00000419181 MCPH1Q8NEM0 835 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 SNX29Q8TEQ0 813 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 TMEM117Q9H0C3 514 aa22.58■■□□□ 1.21
GTF3A-202ENST00000419181 POLR3FQ9H1D9 316 aaPredicted RBP22.58■■□□□ 1.21
GTF3A-202ENST00000419181 BRWD1Q9NSI6 2320 aa22.58■■□□□ 1.2
GTF3A-202ENST00000419181 VCANP13611 3396 aa22.58■■□□□ 1.2
GTF3A-202ENST00000419181 PP2D1A8MPX8 630 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 EOMESO95936 686 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 TFDP1Q14186 410 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 TJAP1Q5JTD0 557 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 TWF2Q6IBS0 349 aaKnown RBP22.57■■□□□ 1.2
GTF3A-202ENST00000419181 ATXN2LQ8WWM7 1075 aaKnown RBP22.57■■□□□ 1.2
GTF3A-202ENST00000419181 P2RX5Q93086 422 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 SNX21Q969T3 373 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 GPRC5CQ9NQ84 441 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 KIAA1024Q9UPX6 916 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 SPTBN5Q9NRC6 3674 aaKnown RBP22.57■■□□□ 1.2
GTF3A-202ENST00000419181 CUL9Q8IWT3 2517 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 MYO7AQ13402 2215 aa22.57■■□□□ 1.2
GTF3A-202ENST00000419181 XIRP2A4UGR9 3374 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 VPS37CA5D8V6 355 aaPredicted RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 ARHGEF35A5YM69 484 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 HOXA11P31270 313 aaPredicted RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 PCBP1Q15365 356 aaKnown RBP eCLIP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 KRT79Q5XKE5 535 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 ARL6IP4Q66PJ3 421 aaKnown RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 PADI6Q6TGC4 694 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 RNF169Q8NCN4 708 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms