RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 KRT27Q7Z3Y8 459 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 RNF10Q8N5U6 811 aaKnown RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 KIAA1958Q8N8K9 716 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 ESR2Q92731 530 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 MRIQ9BWK5 157 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 GOLPH3LQ9H4A5 285 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 GTF3C4Q9UKN8 822 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 LZTS1Q9Y250 596 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 GREB1LQ9C091 1923 aaPredicted RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 VPS37CA5D8V6 355 aaPredicted RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 PIP5K1CO60331 668 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 GADD45BO75293 160 aaPredicted RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 TUBBP07437 444 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 FUT4P22083 530 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 CYP7A1P22680 504 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 NOVP48745 357 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 AARSP49588 968 aaKnown RBP eCLIP9.63□□□□□ -0.87
SP140-204ENST00000417495 COL9A3Q14050 684 aaPredicted RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 TOMM20Q15388 145 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 CYB5R4Q7L1T6 521 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 EXOC3L1Q86VI1 746 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 DDX42Q86XP3 938 aaKnown RBP eCLIP9.63□□□□□ -0.87
SP140-204ENST00000417495 LURAP1LQ8IV03 231 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 CNBD1Q8NA66 436 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 GSDMBQ8TAX9 411 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 CCDC110Q8TBZ0 833 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 PARVGQ9HBI0 331 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 LRP2BPQ9P2M1 347 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
SP140-204ENST00000417495 COL2A1P02458 1487 aaPredicted RBP9.63□□□□□ -0.87
SP140-204ENST00000417495 COL11A2P13942 1736 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 GOLGA8BA8MQT2 603 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 ZBTB43O43298 467 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 FOXD2O60548 495 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 JAK2O60674 1132 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 DNAJC8O75937 253 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 SSBP05455 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
SP140-204ENST00000417495 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 PLCG2P16885 1265 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 IRS1P35568 1242 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 IRAK1P51617 712 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 PLOD1Q02809 727 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 ERICH1Q86X53 443 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 GRAMD2AQ8IUY3 354 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 SP8Q8IXZ3 490 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 LCORLQ8N3X6 602 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 PPP1R14CQ8TAE6 165 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 BCAS4Q8TDM0 211 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 NDNQ99608 321 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 MOV10L1Q9BXT6 1211 aaKnown RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 RNF26Q9BY78 433 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 VIPAS39Q9H9C1 493 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 SUCLA2Q9P2R7 463 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 L1RE1Q9UN81 338 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 SLC4A4Q9Y6R1 1079 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 NEDD4P46934 1319 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 MYH6P13533 1939 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 NR1I2O75469 434 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 SCG2P13521 617 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 TXLNAP40222 546 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 PEX5P50542 639 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
SP140-204ENST00000417495 INO80DQ53TQ3 878 aaPredicted RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 ZNF554Q86TJ5 538 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 TRAPPC9Q96Q05 1148 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 TRIM55Q9BYV6 548 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 VCX3AQ9NNX9 186 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 XPO7Q9UIA9 1087 aaKnown RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 MRPS23Q9Y3D9 190 aaKnown RBP9.62□□□□□ -0.87
SP140-204ENST00000417495 GAKO14976 1311 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
SP140-204ENST00000417495 POTEFA5A3E0 1075 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 NPR3P17342 541 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 TUBA4AP68366 448 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 MXRA7P84157 204 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 KCTD2Q14681 263 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 SEPT2Q15019 361 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 SHROOM1Q2M3G4 852 aaPredicted RBP9.61□□□□□ -0.87
SP140-204ENST00000417495 ACCSLQ4AC99 568 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 TRIM50Q86XT4 487 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 C8orf76Q96K31 380 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 BPIFA3Q9BQP9 254 aa9.61□□□□□ -0.87
SP140-204ENST00000417495 FOXP1Q9H334 677 aaPredicted RBP9.61□□□□□ -0.87
SP140-204ENST00000417495 CASS4Q9NQ75 786 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms