RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 ADGRB2O60241 1585 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 CLASP2O75122 1294 aaKnown RBP6.12□□□□□ -1.43
PTPRK-209ENST00000415046 C4BPAP04003 597 aaKnown RBP6.12□□□□□ -1.43
PTPRK-209ENST00000415046 KRT15P19012 456 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 PTGS1P23219 599 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 HERVK_113P62684 666 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 ST5P78524 1137 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 CRY1Q16526 586 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 FAM47CQ5HY64 1035 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 SPDYAQ5MJ70 313 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 LRP10Q7Z4F1 713 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 USP32Q8NFA0 1604 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 ARMC5Q96C12 935 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 C14orf93Q9H972 538 aaKnown RBP6.12□□□□□ -1.43
PTPRK-209ENST00000415046 INCENPQ9NQS7 918 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 BTBD7Q9P203 1132 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 PLEKHH1Q9ULM0 1364 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 PCDHA9Q9Y5H5 950 aa6.12□□□□□ -1.43
PTPRK-209ENST00000415046 KIF1AQ12756 1690 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 TOPAZ1Q8N9V7 1692 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 RALGAPBQ86X10 1494 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 CCDC66A2RUB6 948 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 TOM1O60784 492 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 CRTAMO95727 393 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 FSHBP01225 129 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 SRGAP2CP0DJJ0 459 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 RAC3P60763 192 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 IL13RA1P78552 427 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 LACTBP83111 547 aaPredicted RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 STILQ15468 1287 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 HS1BP3Q53T59 392 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 ZMAT1Q5H9K5 638 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 ZC3H12BQ5HYM0 836 aaKnown RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 CXXC5Q7LFL8 322 aaKnown RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 GIMAP8Q8ND71 665 aaPredicted RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 C8orf37Q96NL8 207 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 HIRIP3Q9BW71 556 aaPredicted RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 ZDHHC5Q9C0B5 715 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 VPS11Q9H270 941 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 PPP1R1BQ9UD71 204 aaPredicted RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 FBXO10Q9UK96 956 aa6.11□□□□□ -1.43
PTPRK-209ENST00000415046 ZFR2Q9UPR6 939 aaKnown RBP6.11□□□□□ -1.43
PTPRK-209ENST00000415046 ROCK2O75116 1388 aaKnown RBP6.1□□□□□ -1.43
PTPRK-209ENST00000415046 ABCC11Q96J66 1382 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 PRAMEF25A6NGN4 478 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 MPIG6BO95866 241 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 ATF3P18847 181 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 MC4RP32245 332 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 RNF151Q2KHN1 245 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 NBPF8Q3BBV2 869 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 WDR72Q3MJ13 1102 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 EP400NLQ6ZTU2 488 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
PTPRK-209ENST00000415046 GSTCDQ8NEC7 633 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 WNK4Q96J92 1243 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 DEPDC7Q96QD5 511 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 SCAND2PQ9GZW5 306 aaPredicted RBP6.1□□□□□ -1.43
PTPRK-209ENST00000415046 SLC52A2Q9HAB3 445 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 POGKQ9P215 609 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 OAZ3Q9UMX2 235 aa6.1□□□□□ -1.43
PTPRK-209ENST00000415046 COL16A1Q07092 1604 aaPredicted RBP6.1□□□□□ -1.43
PTPRK-209ENST00000415046 DCCP43146 1447 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 MST1RQ04912 1400 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 FAM135BQ49AJ0 1406 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 AKAP12Q02952 1782 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 MARF1Q9Y4F3 1742 aaKnown RBP6.09□□□□□ -1.43
PTPRK-209ENST00000415046 ACVRL1P37023 503 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 GDF5P43026 501 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 DNM2P50570 870 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 NFYCQ13952 458 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 SEC23AQ15436 765 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 NOSTRINQ8IVI9 506 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 SORCS2Q96PQ0 1159 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 PRAM1Q96QH2 718 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 SNTG2Q9NY99 539 aa6.09□□□□□ -1.43
PTPRK-209ENST00000415046 NCOA3Q9Y6Q9 1424 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 SHPRHQ149N8 1683 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 CLSPNQ9HAW4 1339 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 FAM221BA6H8Z2 402 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 MATN2O00339 956 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 KCNK3O14649 394 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 EFCAB14O75071 495 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 RAD17O75943 681 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 HMGCRP04035 888 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 GTF2F1P35269 517 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRK-209ENST00000415046 RRADP55042 308 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 EIF4HQ15056 248 aaKnown RBP6.08□□□□□ -1.44
PTPRK-209ENST00000415046 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
PTPRK-209ENST00000415046 TRIM61Q5EBN2 209 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 CISD2Q8N5K1 135 aaKnown RBP6.08□□□□□ -1.44
PTPRK-209ENST00000415046 EDAQ92838 391 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 BTBD2Q9BX70 525 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 AMNQ9BXJ7 453 aa6.08□□□□□ -1.44
PTPRK-209ENST00000415046 CELF4Q9BZC1 486 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms