RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PRPF6O94906 941 aaKnown RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 C22orf31O95567 290 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 KLRC1P26715 233 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 RFC5P40937 340 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 NKX3-2P78367 333 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 PAK1Q13153 545 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 GRIK4Q16099 956 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 EPM2AIP1Q7L775 607 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 ZNF720Q7Z2F6 126 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 GUF1Q8N442 669 aaKnown RBP17.1■□□□□ 0.33
SHMT2-202ENST00000414700 KLHDC9Q8NEP7 349 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 ASAP3Q8TDY4 903 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 EEF2KMTQ96G04 330 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 SEMA6BQ9H3T3 888 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 ASGR1P07306 291 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
SHMT2-202ENST00000414700 NPTX2P47972 431 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 PSEN2P49810 448 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 CLCN3P51790 818 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 KCNA10Q16322 511 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 COBLL1Q53SF7 1204 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 METTL13Q8N6R0 699 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 BECN2A8MW95 431 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 K7ENM7 598 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 PSMA7O14818 248 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 SLC16A4O15374 487 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 GLRA2P23416 452 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 ARL2P36404 184 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 MYL5Q02045 173 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
SHMT2-202ENST00000414700 CCDC169A6NNP5 214 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 PPP1R37O75864 691 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 STIM1Q13586 685 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 PRPF31Q8WWY3 499 aaKnown RBP17.08■□□□□ 0.33
SHMT2-202ENST00000414700 ZNF668Q96K58 619 aaPredicted RBP17.08■□□□□ 0.33
SHMT2-202ENST00000414700 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.334e-7■■□□□ 13.4
SHMT2-202ENST00000414700 FANCLQ9NW38 375 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 RWDD2AQ9UIY3 292 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.33
SHMT2-202ENST00000414700 ZNF200P98182 395 aaPredicted RBP17.08■□□□□ 0.32
SHMT2-202ENST00000414700 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.32
SHMT2-202ENST00000414700 CENPPQ6IPU0 288 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 TTI2Q6NXR4 508 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 ENOX1Q8TC92 643 aaKnown RBP17.08■□□□□ 0.32
SHMT2-202ENST00000414700 P2RX5Q93086 422 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.32
SHMT2-202ENST00000414700 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 PPME1Q9Y570 386 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 PAXBP1Q9Y5B6 917 aa17.08■□□□□ 0.32
SHMT2-202ENST00000414700 COL1A2P08123 1366 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 IKBKBO14920 756 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 CCNE1P24864 410 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 CST5P28325 142 aaPredicted RBP17.07■□□□□ 0.32
SHMT2-202ENST00000414700 NCKAP1LP55160 1127 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 TMEM161BQ8NDZ6 487 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 ZNF507Q8TCN5 953 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 DHTKD1Q96HY7 919 aaPredicted RBP17.07■□□□□ 0.32
SHMT2-202ENST00000414700 DUSP9Q99956 384 aaKnown RBP17.07■□□□□ 0.32
SHMT2-202ENST00000414700 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
SHMT2-202ENST00000414700 KCTD10Q9H3F6 313 aa17.07■□□□□ 0.32
SHMT2-202ENST00000414700 MSCO60682 206 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 RTP1P59025 263 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 CAPSQ13938 189 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
SHMT2-202ENST00000414700 LINC01465Q8N7H1 131 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 IPO4Q8TEX9 1081 aaKnown RBP17.06■□□□□ 0.32
SHMT2-202ENST00000414700 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
SHMT2-202ENST00000414700 C17orf75Q9HAS0 396 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 KMT5AQ9NQR1 393 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 KIAA0100Q14667 2235 aaKnown RBP17.06■□□□□ 0.32
SHMT2-202ENST00000414700 NRCAMQ92823 1304 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 ADAM17P78536 824 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
SHMT2-202ENST00000414700 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms